XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCACTG
TACCCCATAGAGGAGACAAAGAATTAGGATGGTGGGGGAAATATGTCTTC
TGAGAGCATTTCATTGACCTACTTTTTCCAACTTTTTCCCACCTCTTACG
TTGTAGTATTTCTCACCAGTGCTACCATATAATCAGTTCATCAGAGGATT
AGTTCATTAGTTCATTCAAGAGCCCTTATGATTCTTTCTCTTCCCCAGAG
TCCATCAGCTGGCAATCAAGCCATGAGCACACTATCCTTTTAAAGTCTTC
CAAGATTCATGCTATAACAACTTTCAACTTATCCTGTGGCCCACTGTCTT
TGTTACAAGTTTTACCGTTTACATTATGTCTTAAGGAATCCTGGGTCTAA
TTTTGTGTTTTATTGGCCACTATGTGTAGCTATTATTACTTCTGTAATCT
TCTTTTTTGACACTGTTGTGCTTTATTACAGCAGACAAGCTTGTTTCCTC
TCTCTTGGATTTCTGTGATAGGCTTCCTTGATCTCTAGCTGTCCTAAGTG
TTCTGCATATAGCTACCAGAGTTATTTGAGAGAACGGACTTCAGTAGGCC
ACTTCTTTGGTTCAAGCTTCTGATATCTCTTCAAAGCATGAAAGGTAAAA
ACTCAAACCCTGTGTTTGTTCCTAACCTGTTTTTCAGCT

AACATAAAATAATTTTATTATCACACAAACACCCAANNCCNCNATTTTCC
ATTCTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGCTTGCCTGTGGGGTTGT
TTTTGTTTTTGTTTTTGTTTTTGTTTTTCTAGGTTGAAGCCTGGTGAGTT
TCTGCCTACCCATGGCTATTGGTGATATCCTTGCTCAGGTCATGTTTAGG
CATCCGCATTGGTAAGACTTAGGAGACCCAATCTCACAGAAAACTCCCCG
ATCCTCTGACTCTCACAATCTTTCTGCCTTGTTCTTCACAATGATCCCTG
AACCTCAGATGAACCTCAGATTAGTTATCTTGTAGATGTGTCAGATGGTT
CTGGGCTCCACAAAATATAGCCACAAACCCCAGTCTAGTGAAGTCATGAC
TTGTTAGGGAGCCTACAACTTCCACTTTATTAAATCGATTTGGTACTTTT
TAATGCAGTTTCTGCCAGTAAGTCACTGGTGGTCTCTGTAGTGAGTCTAT
GTTTGGTAACTCACAGATAGTGAACTAGTGACTAGTCTAGAGGCAGAGAG
AACAGACAGTCTCTGATACTAAAGATGGCCTAGTCGGCCATCTCTGGGAA
GAGAGGCCCATTGGACTTTGCAAACTTTATATGCCCCATAACTGGTGAAA
CACCGGTCCAAATGGGGCTATGGTTGTCCCAGTCTATGGGTTGTTGTTTT
ATCTTTATTTTCTTCTTTCTCTTTTTTTTTCTTCTA

Query= MSMg01no101_e23.b1 MSMg01no101_e23.b1 CHROMAT_FILE:
MSMg01no101_e23.b1 PHD_FILE: MSMg01no101_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:59:28 2005
         (623 letters)



>mm_chr19_43385899_43386920
          Length = 1022

 Score = 1116 bits (577), Expect = 0.0
 Identities = 608/623 (97%), Gaps = 9/623 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaagaattaggatggtgggggaaatatgtcttctgagagcatttcattgacctactttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 caaagaattaggatggtgggggaaatatgtcttctgagagcatttcattgacctactttt 889

                                                                       
Query: 61  tccaactttttcccacctcttacgttgtagtatttctcaccagtgctaccatataatcag 120
           |||||| |   |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tccaacatgaccccacctcttacgttgtagtatttctcaccagtgctaccatataatcag 829

                                                                       
Query: 121 ttcatcagaggattagttcattagttcattcaagagcccttatgattctttctcttcccc 180
           ||||||        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 ttcatc--------agttcattagttcattcaagagcccttatgattctttctcttcccc 777

                                                                       
Query: 181 agagtccatcagctggcaatcaagccatgagcacactatccttttaaagtcttccaagat 240
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 agagtctatcagctggcaatcaagccatgagcacactatccttttaaagtcttccaagat 717

                                                                       
Query: 241 tcatgctataacaactttcaacttatcctgtggcccactgtctttgttacaagttttacc 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tcaagctataacaactttcaacttatcctgtggcccactgtctttgttacaagttttacc 657

                                                                       
Query: 301 gtttacattatgtcttaaggaatcctgggtctaattttgtgttttattggccactatgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gtttacattatgtcttaaggaatcctgggtctaattttgtgttttattggccactatgtg 597

                                                                       
Query: 361 tagctattattacttctgtaatcttcttttttgacactgttgtgctttattacagcagac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tagctattattacttctgtaatcttcttttttgacactgttgtgctttattacagcagac 537

                                                                       
Query: 421 aagcttgtttcctctctcttggatttctgtgataggcttccttgatctctagctgtccta 480
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 536 aagcttgtttcctctctcttggatttct-tgataggcttccttgatctctagctgtccta 478

                                                                       
Query: 481 agtgttctgcatatagctaccagagttatttgagagaacggacttcagtaggccacttct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agtgttctgcatatagctaccagagttatttgagagaacggacttcagtaggccacttct 418

                                                                       
Query: 541 ttggttcaagcttctgatatctcttcaaagcatgaaaggtaaaaactcaaaccctgtgtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttggttcaagcttctgatatctcttcaaagcatgaaaggtaaaaactcaaaccctgtgtt 358

                                  
Query: 601 tgttcctaacctgtttttcagct 623
           |||||||||||||||||||||||
Sbjct: 357 tgttcctaacctgtttttcagct 335


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1022
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1012
Effective search space:   620356
Effective search space used:   620356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)