Query= MSMg01no105_f13.b1 MSMg01no105_f13.b1 CHROMAT_FILE:
MSMg01no105_f13.b1 PHD_FILE: MSMg01no105_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:57 2005
(242 letters)
>mm_chr19_15581904_15582544
Length = 641
Score = 437 bits (226), Expect = e-127
Identities = 238/242 (98%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 1 catagaaactatagggtaggagcagtatacatgagccaggctcccatgtaagaaaaaaaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 catagaaactatagggtaggagcagtatacatgagccaggctaaaatgtaagaaaaaaaa 260
Query: 61 atctctaataaaaggtagatctatttgattttgaagttagataaagtctcaagtgtcaaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 -tctctaataaaaggtagatctatttgattttgaagttagataaagtctcaagtgtcaaa 319
Query: 121 atgtatataatattggatatacaaaggaagaaatgcaatccaacaccttgaactgaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atgtatataatattggatatacaaaggaagaaatgcaatccaacaccttgaactgaattt 379
Query: 181 gcggtgaactagatgtgaatggagatagacatgctcattgaatttgtggagagctgtatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcggtgaactagatgtgaatggagatagacatgctcattgaatttgtggagagctgtatg 439
Query: 241 tg 242
||
Sbjct: 440 tg 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 641
Length adjustment: 9
Effective length of query: 233
Effective length of database: 632
Effective search space: 147256
Effective search space used: 147256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no105_f13.g1 MSMg01no105_f13.g1 CHROMAT_FILE:
MSMg01no105_f13.g1 PHD_FILE: MSMg01no105_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:57 2005
(167 letters)
>mm_chr19_15764998_15765564
Length = 567
Score = 308 bits (159), Expect = 2e-88
Identities = 165/167 (98%)
Strand = Plus / Minus
Query: 1 atggtgtcagaaggctggttctccatgctctgagagcaaagtgagcattctcaggtacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 367 atggtgtcagaaggctggttctccatgctctgagagcaaagtgagcattctcagggacag 308
Query: 61 tgtgctgttggcttcatgggatataaaccaatgctgcttattatttaattccagctcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tgtgctgttggcttcatgggatataaaccaatgctgcttattatttaattccagctcttg 248
Query: 121 cccctggcccaagatgttcttgatgttcctgtattttcttaaagttg 167
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gccctggcccaagatgttcttgatgttcctgtattttcttaaagttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space: 88881
Effective search space used: 88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
