This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
Search Parameter
BAC name
Region
Chromosome
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2
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Gene
search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-112E01
Chromosome
19 (Build37)
Map Location
51,246,994 - 51,319,087
singlet/doublet
doublet
Overlap gene
none
Upstream gene
Sorcs1
Downstream gene
LOC100042924
,
LOC100042928
,
LOC668536
,
LOC100042936
Link
Open Mouse BAC browser
Click to get alignment info.
name
Sorcs1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:58178
MGI:1929666
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100042924
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042924
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
name
LOC100042928
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042928
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo
: _no_value
name
LOC668536
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668536
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 5 Proteins
pseudo
: _no_value
name
LOC100042936
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042936
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
Sorcs1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:12025517
GeneID:58178
MGI:1929666
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: VPS10 domain receptor protein SORCS 1
transcript_id
: NM_021377.1
name
LOC100042924
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149270513
GeneID:100042924
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
product
: similar to Ubtf protein
transcript_id
: XM_001479081.1
name
Sorcs1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:12025518
GeneID:58178
MGI:1929666
definition
GO_component
: GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0008565 - protein transporter activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]
GO_process
: GO:0006886 - intracellular protein transport [Evidence IEA]
codon_start
: 1
exception
: unclassified translation discrepancy
product
: SORCS receptor 1
protein_id
: NP_067352.1
name
LOC100042924
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149270514
GeneID:100042924
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001479131.1
name
LOC100042928
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042928
definition
number
: 1
pseudo
: _no_value
name
LOC100042936
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042936
definition
number
: 2
pseudo
: _no_value
name
LOC100042936
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042936
definition
number
: 1
pseudo
: _no_value
name
LOC668536
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149270565
GeneID:668536
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 5 Proteins
product
: similar to ribosomal protein L31
pseudo
: _no_value
transcript_id
: XR_034741.1
clone name
MSMg01-495E03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-152J22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-186H01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-054D02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-122A15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-435J06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-416D15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-194O09
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-299D16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-373P06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-096D19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-348G16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-491B13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-099I23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341J01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-176L16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-179F03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-288G20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-488C21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-366C14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-418P02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-347P22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-050K21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-273H21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-548P05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-067G23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-348B24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-416H16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-047J06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-260C06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-113A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-451C15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-446J06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-267O07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-376J17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-047C17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-237B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-409O22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-538I11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-434F22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-136E15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-372H15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-537I09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-472C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-112E01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-078G01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-433N11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-295K03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-301P23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-216D05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-215I21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-418J16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-519K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164B19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482D12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-548F06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-432L10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341H17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-520G03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-442O14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-135O08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-545P23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-051M06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-052L23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-384P15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-486J19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-428L14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-110L15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-161K08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-321N01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-391O12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-540A24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-351I10
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-490H21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-295I07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336J12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-237G01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-507H02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-143I02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-051N01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-546K11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-074B05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-112O09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502F01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-383K08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-382G21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-473C08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-359A13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-344F17
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-357B15
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-392O15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-321P24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-231P22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-531L12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-390N15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-217A20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-399F16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-455B01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-103I06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-130L15
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-372D08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-397M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-482I10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-166M10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-369I20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-071H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-092F17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-103K22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-301I08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-161N18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-270A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-044H10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-169H06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-340A11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-002B03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-343E08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-301F22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-085L17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-043D20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236C11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-074N12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-139P17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-243F23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252I17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-029N11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-062A05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-200J20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-329N24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-290N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-258I04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-337I04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-095A24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-105L06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-009G06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-281J23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-147D22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-031M06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-262I12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-127D20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-314K21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-175A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-175D11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-261M07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-290P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-048I24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-268I16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-108K23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-192J12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-223D05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-298F17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-025N14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-228G19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-159L08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-259L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-186B20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-077N05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-307G04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-324D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-071D03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-145J07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286D01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-288L10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-349P19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286K02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-046N02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-093G16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-100J06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-214G01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-154I21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-278F18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-178L13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-169O06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-209K19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-078H05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-209A16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-264F04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-166D24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-226E17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-212P07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203D15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-167G05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-170N14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-281N16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206O21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-149K05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-065F11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-197O08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-335D15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-132F05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-307I09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-307I11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-109C06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-124H20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-118D18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-080M23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-113G10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-209K03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-243O12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-065D20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-067K21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-275F19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-223F02
singlet/doublet
doublet
plural/unique
unique