MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-114C24
Chromosome	19 (Build37)
Map Location	25,187,316 - 25,187,854
singlet/doublet	singlet
Overlap gene	Dock8
Upstream gene	Tjp2, Fxn, LOC667743, Pip5k1b, LOC100042457, 2900009I07Rik, E030010A14Rik, Pgm5, LOC672195, Foxd4, Cbwd1, LOC100042503
Downstream gene	Ankrd15, LOC433233, LOC383474, Dmrt1, Dmrt3, Dmrt2, EG667806, 1700048O14Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tjp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21873 MGI:1341872
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fxn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14297 MGI:1096879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667743 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667743
definition	note : heterogeneous nuclear ribonucleoprotein A1 pseudogene pseudo : _no_value

name	Pip5k1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18719 MGI:107930
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042457 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042457
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	2900009I07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68034 MGI:1915284
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030010A14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226040 MGI:3583948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgm5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226041 MGI:1925668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672195 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 486 ESTs, 11 Proteins

name	Foxd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14237 MGI:1347467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cbwd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226043 MGI:2385089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dock8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76088 MGI:1921396
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 219 ESTs, 4 Proteins

name	Ankrd15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107351 MGI:2147707
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433233 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1207 ESTs, 7 Proteins pseudo : _no_value

name	LOC383474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Dmrt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50796 MGI:1354733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmrt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240590 MGI:2449470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmrt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226049 MGI:1330307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667806 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667806 MGI:3647098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 15 ESTs, 15 Proteins pseudo : _no_value

name	1700048O14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73433 MGI:1920683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Tjp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353787 GeneID:21873 MGI:1341872
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tight junction protein 2 transcript_id : NM_011597.2

name	Fxn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892935 GeneID:14297 MGI:1096879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : frataxin transcript_id : NM_008044.2

name	Pip5k1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110835699 GeneID:18719 MGI:107930
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol-4-phosphate 5-kinase, type 1 beta transcript_id : NM_008846.2

name	LOC100042457 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270451 GeneID:100042457
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042457 transcript_id : XM_001478372.1

name	2900009I07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560149 GeneID:68034 MGI:1915284
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900009I07 gene transcript_id : NM_026520.2

name	E030010A14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387742 GeneID:226040 MGI:3583948
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E030010A14 gene transcript_id : NM_183160.3

name	Pgm5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68299817 GeneID:226041 MGI:1925668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphoglucomutase 5 transcript_id : NM_175013.2

name	LOC672195 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270455 GeneID:672195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 407 ESTs, 11 Proteins product : similar to cytochrome c, transcript variant 2 transcript_id : XM_001478404.1

name	LOC672195 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270453 GeneID:672195
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 485 ESTs, 11 Proteins product : similar to cytochrome c, transcript variant 1 transcript_id : XM_001478395.1

name	Foxd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679840 GeneID:14237 MGI:1347467
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box D4 transcript_id : NM_008022.1

name	Cbwd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130238 GeneID:226043 MGI:2385089
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : COBW domain containing 1 transcript_id : NM_146097.2

name	Dock8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62241029 GeneID:76088 MGI:1921396
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dedicator of cytokinesis 8 transcript_id : NM_028785.3

name	LOC100042503 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270459 GeneID:100042503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 219 ESTs, 4 Proteins product : similar to NADH dehydrogenase 1 beta subcomplex 4 transcript_id : XM_001478443.1

name	Ankrd15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75677562 GeneID:107351 MGI:2147707
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat domain 15 transcript_id : NM_181404.5

name	Dmrt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803189 GeneID:50796 MGI:1354733
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublesex and mab-3 related transcription factor 1 transcript_id : NM_015826.3

name	Dmrt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31340761 GeneID:240590 MGI:2449470
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublesex and mab-3 related transcription factor 3 transcript_id : NM_177360.2

name	Dmrt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347379 GeneID:226049 MGI:1330307
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublesex and mab-3 related transcription factor 2 transcript_id : NM_145831.2

name	1700048O14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270408 GeneID:73433 MGI:1920683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700048O14 gene transcript_id : XM_001477095.1

name	Tjp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7549795 GeneID:21873 MGI:1341872
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : unclassified translation discrepancy product : tight junction protein 2 protein_id : NP_035727.1

name	Fxn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679863 CCDS:CCDS29711.1 GeneID:14297 MGI:1096879
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_process : GO:0006879 - iron ion homeostasis [Evidence IEA] codon_start : 1 note : Friedreich ataxia product : frataxin protein_id : NP_032070.1

name	Pip5k1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679329 GeneID:18719 MGI:107930
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016308 - 1-phosphatidylinositol-4-phosphate 5-kinase activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0046488 - phosphatidylinositol metabolism [Evidence IDA] codon_start : 1 note : phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha (MGD\|MGI:107930 GB\|NM_008846, evidence: BLASTN, 99%, match=2376); putative; PI4P5K-I[b] product : phosphatidylinositol-4-phosphate 5-kinase, type 1 beta protein_id : NP_032872.1

name	LOC100042457 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270452 GeneID:100042457
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478422.1

name	2900009I07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19882245 CCDS:CCDS29712.1 GeneID:68034 MGI:1915284
definition	codon_start : 1 product : hypothetical protein LOC68034 protein_id : NP_080796.1

name	E030010A14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147189 CCDS:CCDS29713.1 GeneID:226040 MGI:3583948
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : RIKEN cDNA E030010A14 protein_id : NP_898983.1

name	Pgm5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70608166 CCDS:CCDS29714.1 GeneID:226041 MGI:1925668
definition	GO_function : GO:0016868 - intramolecular transferase activity, phosphotransferases [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : phosphoglucomutase 5 protein_id : NP_778178.3

name	LOC672195 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270454 GeneID:672195
definition	codon_start : 1 product : similar to cytochrome c isoform 1 protein_id : XP_001478445.1

name	LOC672195 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270456 GeneID:672195
definition	codon_start : 1 product : similar to cytochrome c isoform 2 protein_id : XP_001478454.1

name	Foxd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679841 CCDS:CCDS29715.1 GeneID:14237 MGI:1347467
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : forkhead homolog 2 product : forkhead box D4 protein_id : NP_032048.1

name	Cbwd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122605 GeneID:226043 MGI:2385089
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : dopamine responsive protein product : dopamine-responsive protein protein_id : NP_666209.1

name	Dock8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62241030 GeneID:76088 MGI:1921396
definition	GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0051020 - GTPase binding [Evidence IEA]; GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA] codon_start : 1 product : dedicator of cytokinesis 8 protein_id : NP_083061.2

name	LOC100042503 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270460 GeneID:100042503
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478493.1

name	Ankrd15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677563 GeneID:107351 MGI:2147707
definition	codon_start : 1 product : ankyrin repeat domain 15 protein_id : NP_852069.4

name	Dmrt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254566 CCDS:CCDS29717.1 GeneID:50796 MGI:1354733
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007548 - sex differentiation [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : doublesex and mab-3 related transcription factor 1 protein_id : NP_056641.2

name	Dmrt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893523 CCDS:CCDS29718.1 GeneID:240590 MGI:2449470
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007548 - sex differentiation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : doublesex and mab-3 related transcription factor 3 protein_id : NP_796334.1

name	Dmrt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789377 CCDS:CCDS29719.1 GeneID:226049 MGI:1330307
definition	codon_start : 1 note : terra homolog product : terra protein_id : NP_665830.1

name	1700048O14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270409 GeneID:73433 MGI:1920683
definition	codon_start : 1 product : hypothetical protein LOC73433 protein_id : XP_001477145.1

name	LOC383474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383474
definition	number : 1 pseudo : _no_value

name	LOC383474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383474
definition	number : 2 pseudo : _no_value

name	LOC383474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383474
definition	number : 3 pseudo : _no_value

name	LOC383474 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:383474
definition	number : 4 pseudo : _no_value

name	LOC433233 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270463 GeneID:433233
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 1207 ESTs, 7 Proteins product : similar to hCG2028724 pseudo : _no_value transcript_id : XR_033703.1

name	EG667806 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270466 GeneID:667806 MGI:3647098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 15 ESTs, 15 Proteins product : predicted gene, EG667806 pseudo : _no_value transcript_id : XR_002082.2

clone name	MSMg01-299C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432B13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-132B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136E11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-496P18
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-321P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062E21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-159J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213J23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-114C24.T7 (MSMg01no114_c24.b1)	MSMg01-114C24.TJ (MSMg01no114_c24.g1)
ACC	AG326132	AG326133
length	736	1,011
length of high quality (start - end)	542 (33 - 574)	---
definition	CHROMAT_FILE: MSMg01no114_c24.b1 PHD_FILE: MSMg01no114_c24.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:19:49 2005	CHROMAT_FILE: MSMg01no114_c24.g1 PHD_FILE: MSMg01no114_c24.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:19:49 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACTCGGAC AACCGGATTCTTCTACGGCAAAGCTTTATTGCTTCATCTGAAGGAAGACC CTGAACAAGGAAAATGGTGCCGCCTATATACCCCTTCGTGTGACGTGTCA GCTCCTGATTAGCTGCTCACTCATCACCCCACTACTACGCCCCGGGATGG GCAGTGACTTATTTACTCTTGCACCTGCGCACATTACTTGTTTACCAGTT AGGCACAGCGGAGGCTCATGATGGCGATTGCTCATGGCTCTCCACACACA GTCATAAGTATATAAATGGCATATTGCTGAATCTGTGGGAAGAATTAACA CCCTATAGAGCTGCTAATCAAGAGAATCCATCTGAAGGATGCTTAAAACA CTCTTTGGAAGGGTAACATCCAATTTTCTCCTTCTCTAAGCTGGGGTGCA TATAAGTAAAAAACATCTCTTTGATTACATTTCTCCAAATGTGATTTTAA AAAATGAGATTAGGCTCAGATGTCTTGCACATTCATGAGGCCTCTAGTTA TACAGAACCTGTCAAAACAGCTTCATTCTTCATATGAGTGATTCCTGTTT ACAATATGGACTGTCTTCTTACAGGCTCTTCAATAATGTAATTTTTACAA TTTTCCTTAATACTAGCTTATACTATAAATCACACGGGCCTGTTGACCAG TTGGCTAAGATTACTCTTCTCTGNATACAGCTCTGG	CAAAAAAAAAACTTTCCCTAATCAACACAACAAAAAATCCCCCACAGCTT TGCTAGACAGTCAAATACTAAATAGCCGCGGAACCCATATCTGTCCGCGT TTCGCCGGAGGCCGACGGCGAGCTATTACATCGACAGAAAAACCCGACTG CACAAATAAACTTTCTAGAAAATCGGGTGCCATACCAAATAGGTGGCCAC AAACGCGTGCGGCCCAAGGCCTTCTTTAACGAAGCGCAACTTATGCTAAT GGTGGGCGGTAATATGATCCGATTATTCTTGGAGTGAAAGAATTACCCGC GCTCAATGTCCACGGCGCAGGTATAATCCAACGCCACGGCCGCAACCGCG GCGACAACTAGGCAAAACGATGAAACAGTGGGACACCAGGGTGACAAGCC GTTGGGACGGCACATCCCGGTCTGGGCTAAGGTTACACTACATACGCAAA TTACCGCGTTATAAAATCGGCCCACAGGGAAGCAAGCGATAAAAACCGCA GCACAGAGAATAAGCGCAACATACGGTGACACAGATTTATCGCGCGGGGC AAGTTCCGCTACGGCTGTTACCTTACGGGCTATGAATCCCTAAGGCCGAA CCGGACCGTGACGGGGGGAAAGGTACGGCTTCCGAATACGCATGGCCGCT ACCTATTCGCCCCATAACGTGCGAAACGCCGCCATGGCCCGACCTCCCGG CCCACGTACGATCGTTATATAATACAGTAATGTCGCAAACCGGCGCGGGA GACATAAATAAACCCGCGCCAAAAACAATAACCGGGCGTTGCGGAAGCGC ACACACATGACACATATAAGCCACGGTAGACACGAGATGGTAAAAAAATC GAGCAAGGCCGCAATATATGGCCGGGACAGTTCGGTAACCACACAATGNT GAGGGATCAAAACTTCGTGCCGACACACCGTTAGTTCTGAACAAAAACCA TTATTTTGCCCGCCGTCGTCTCATATCATTACAATATAATTTTACGACGG AAACCGCGCAC
quality values	Open. Hide. 9 9 12 19 12 12 8 8 8 21 21 43 26 24 23 23 23 34 39 27 24 11 11 12 15 24 30 31 29 22 22 22 24 41 41 42 42 51 47 42 48 47 47 42 42 41 37 31 48 42 37 26 28 30 30 30 42 43 48 47 47 48 47 43 44 40 38 36 48 48 68 57 59 57 57 57 57 68 68 57 57 54 42 57 37 37 37 57 59 57 57 57 68 68 68 68 68 59 59 59 57 57 57 50 50 41 52 47 50 59 68 57 51 50 50 50 50 57 43 43 35 35 35 38 43 50 57 57 68 57 57 59 59 52 57 57 57 43 52 57 57 68 68 68 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 57 57 68 68 68 68 57 57 59 59 59 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 62 62 54 54 52 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 62 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 62 62 59 59 59 68 68 57 57 52 52 52 57 59 68 68 57 57 57 45 45 45 57 59 57 57 68 68 68 57 57 57 57 59 59 59 59 57 57 57 57 57 57 57 57 59 57 52 52 57 57 57 57 57 57 57 57 57 57 57 57 52 52 52 57 59 59 59 57 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 54 59 59 59 59 68 68 48 48 37 37 39 44 57 57 57 57 57 57 57 57 57 57 39 39 39 43 44 48 32 32 20 20 20 32 34 54 54 54 57 57 57 57 57 57 54 54 54 59 59 59 57 43 43 43 43 43 44 44 57 32 32 31 20 20 32 32 43 43 40 43 43 40 37 37 31 32 26 34 17 17 17 30 30 29 27 27 25 32 37 47 37 41 37 37 41 43 39 35 35 30 31 31 34 31 37 28 30 24 22 22 26 31 30 30 30 32 25 25 16 17 15 25 16 15 15 15 16 20 32 30 34 34 28 23 23 28 24 28 39 32 34 25 22 22 21 23 17 16 16 23 32 41 34 26 29 23 20 15 19 15 22 22 35 31 29 34 28 28 24 31 31 28 32 27 25 28 22 25 32 28 26 32 23 18 15 16 16 19 26 20 32 37 30 25 28 20 21 14 16 18 22 16 18 27 22 26 26 21 21 14 28 25 27 15 19 19 19 19 24 30 30 31 32 16 22 11 11 11 12 12 11 10 17 15 8 11 10 15 16 19 32 28 17 17 17 22 22 22 25 30 17 18 11 11 11 16 14 32 19 19 13 13 13 18 18 16 8 3 0 3 6 8 15 15 20 16 16 15 15 12 12	Open. Hide. 8 8 8 8 10 11 11 11 9 9 9 9 9 9 12 12 10 10 8 6 8 6 6 8 8 8 8 8 6 8 6 6 8 8 8 8 6 6 8 8 9 10 10 9 8 8 8 8 9 10 8 8 8 8 6 6 8 8 9 10 10 10 10 10 8 9 8 9 9 9 10 9 9 10 8 8 6 10 6 6 8 8 10 8 8 8 8 8 8 6 8 8 8 8 8 6 6 8 8 11 8 9 9 9 9 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 16 12 11 11 10 8 8 7 7 8 10 6 6 8 8 8 10 10 8 8 8 10 10 8 9 8 8 8 8 8 8 8 8 10 10 8 11 10 10 8 8 6 6 8 8 11 10 8 8 6 6 8 8 10 8 8 8 8 8 8 8 10 10 10 8 8 9 9 11 11 12 12 12 12 12 8 8 8 8 8 8 10 10 9 9 9 9 9 8 8 7 7 8 8 8 8 8 8 8 8 8 8 8 9 10 10 11 11 13 11 9 9 10 10 8 8 8 9 9 10 12 8 8 8 8 8 8 8 8 8 9 9 10 10 10 10 9 9 9 10 12 16 11 8 8 8 8 8 8 6 6 8 6 6 8 8 8 8 8 8 8 8 11 8 8 8 8 8 8 8 8 9 9 10 10 8 8 8 8 8 8 9 12 12 8 8 6 6 8 8 8 8 6 6 8 6 8 8 8 10 10 10 10 8 8 8 8 8 7 9 9 9 9 8 8 10 10 12 9 11 11 9 9 9 9 8 8 8 8 8 8 8 9 10 12 12 16 10 10 10 10 10 10 10 16 9 9 9 9 8 8 6 6 8 8 6 6 8 8 9 9 9 11 11 11 10 10 11 9 8 8 8 6 6 8 8 8 8 8 8 8 8 9 9 10 9 8 8 8 8 8 8 8 8 8 8 10 13 8 8 8 8 8 8 8 8 6 6 8 8 9 8 8 6 6 8 8 8 8 11 8 8 6 6 8 8 12 15 10 10 10 8 8 8 10 8 10 10 10 11 10 10 10 11 8 8 10 10 10 10 10 10 13 14 13 13 13 8 8 7 7 11 8 7 7 8 8 6 6 8 8 9 9 10 9 8 8 8 8 10 6 6 8 8 6 6 8 8 8 8 8 10 7 6 8 8 8 8 6 6 8 8 8 8 8 10 8 14 11 10 8 8 8 8 8 8 8 9 9 8 8 8 8 8 6 6 8 10 8 8 6 6 8 8 11 11 8 8 8 10 8 8 6 6 6 6 8 8 10 6 6 6 6 8 8 6 7 10 8 8 8 9 9 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 12 10 8 10 10 10 10 8 8 6 6 8 10 7 7 6 8 8 6 6 8 8 8 8 8 6 6 6 8 8 8 8 8 13 10 12 9 8 10 8 9 9 9 9 9 10 8 8 9 8 8 8 8 8 8 9 9 9 11 11 10 10 10 8 8 6 6 8 8 9 12 6 6 6 6 6 8 8 8 10 10 8 8 10 10 12 12 13 10 14 8 8 6 6 8 8 10 10 9 9 10 8 8 7 6 8 8 8 8 8 8 8 8 11 11 12 10 10 10 8 8 12 12 9 9 9 9 9 8 8 6 6 8 6 6 8 8 8 8 6 6 8 8 9 9 6 6 6 6 8 8 11 11 11 11 13 11 11 8 8 6 6 8 6 11 11 9 9 8 8 9 9 8 8 11 10 10 10 10 10 8 10 8 8 8 8 8 8 8 8 8 8 7 10 10 9 9 8 8 8 6 6 8 8 6 6 8 8 11 8 8 8 8 8 8 8 8 8 8 8 8 9 9 11 13 16 17 10 8 6 6 8 8 8 10 11 11 11 11 11 11 8 8 6 6 8 8 6 7 8 8 13 8 8 8 8 8 8 6 6 6 6 6 6 6 6 8 6 6 8 8 8 8 8 10 8 8 8 8 3 0 3 8 8 8 8 8 8 8 8 8 12 11 9 8 7 8 8 10 8 8 8 8 8 8 12 12 8 8 8 6 6 6 6 6 7 7 10 8 9 10 10 10 10 13 12 12 12 12 12 11 11 11 10 10 9 13 9 10 10 8 12 8 8 8 8 10 10 8 6 6 6 6 10 6 8 8 10 7 6 8 6 8 8 8 8 8 6 6 6 7 8 8 8 10 8 8 6 6 8 10 6 8 8 8 8 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no114_c24.b1 MSMg01no114_c24.b1 CHROMAT_FILE:
MSMg01no114_c24.b1 PHD_FILE: MSMg01no114_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:49 2005
         (542 letters)



>mm_chr19_25187112_25188054
          Length = 943

 Score =  949 bits (491), Expect = 0.0
 Identities = 527/539 (97%), Gaps = 1/539 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactcggacaaccggattcttctacggcaaagctttattgcttcatctgaaggaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactcggacaaccggattcttctacggcaaagctttattgcttcatctgaaggaa 264

                                                                       
Query: 65  gaccctgaacaaggaaaatggtgccgcctatataccccttcgtgtgacgtgtcagctcct 124
           ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 265 gaccccgaacaaggaaaatggtgccgcctatataccccttcgtgtgacatgtcagctcct 324

                                                                       
Query: 125 gattagctgctcactcatcaccccactactacgccccgggatgggcagtgacttatttac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gattagctgctcactcatcaccccactactacgccccgggatgggcagtgacttatttac 384

                                                                       
Query: 185 tcttgcacctgcgcacattacttgtttaccagttaggcacagcggaggctcatgatggcg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttgcacctgcgcacattacttgtttaccagttaggcacagcggaggctcatgatggcg 444

                                                                       
Query: 245 attgctcatggctctccacacacagtcataagtatataaatggcatattgctgaatctgt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 attgctcatggctctccacacacagtcataagtatataaatggcatattcctgaatctgt 504

                                                                       
Query: 305 gggaagaattaacaccctatagagctgctaatcaagagaatccatctgaaggatgcttaa 364
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gggaagaattaacaacctatagagctgctaatcaagagaatccatctgaaggatgcttaa 564

                                                                       
Query: 365 aacactctttggaagggtaacatccaattttctccttctctaagctggggtgcatataag 424
           ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 565 aacactctttggaagggtaacatccaactttctccttctctaagctgggatgcatataag 624

                                                                       
Query: 425 taaaaaacatctctttgattacatttctccaaatgtgattttaaaaaatgagattaggct 484
           ||||||||||||||||||||||||||||||||||||||||  ||||||| |||| |||||
Sbjct: 625 taaaaaacatctctttgattacatttctccaaatgtgattaaaaaaaataagatgaggct 684

                                                                      
Query: 485 cagatgtcttgcacattcatgaggcctctagttat-acagaacctgtcaaaacagcttc 542
           |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 685 cagatgccttgcacattcatgaggcctctagttattacagaacctgtcaaaacagcttc 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 943
Length adjustment: 10
Effective length of query: 532
Effective length of database: 933
Effective search space:   496356
Effective search space used:   496356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information