Query= MSMg01no123_f07.b1 MSMg01no123_f07.b1 CHROMAT_FILE:
MSMg01no123_f07.b1 PHD_FILE: MSMg01no123_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:55 2005
(418 letters)
>mm_chr19_37065810_37066627
Length = 818
Score = 756 bits (391), Expect = 0.0
Identities = 404/409 (98%), Gaps = 2/409 (0%)
Strand = Plus / Plus
Query: 8 ttctcagtggcagagattagatttagtacatccacatgatgatttttatgctcctggttg 67
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 208 ttctcagtggcagagattagatttagtatatccacatgatgatttttatgctcctggttg 267
Query: 68 gaaattgagaattaatcttcgtgtgatacacaaacatttgagttgtcccatggaacctga 127
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 268 gaaattgagaattaatcttcgtgtgatacacaaagaattgagttgtcccatggaacctga 327
Query: 128 ctccctcttctgactttttctggcacaaggcatgaaaataaaataataagatttttaaaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctccctcttctgactttttctggcacaaggcatgaaaataaaataataagatttttaaaa 387
Query: 188 attaaaacacacacacatacacagtttgtctgtgtaccatgtgcatgcatagtacccatg 247
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attaaaacacacacac--acacagtttgtctgtgtaccatgtgcatgcatagtacccatg 445
Query: 248 gaaactagaagaggacatcagatcccctgggactggagttccaggtggttgtgagctctt 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gaaactagaagaggacatcagatcccctgggactggagttccaggtggttgtgagctctt 505
Query: 308 aggtgggttctgtgtatcaaatccaggtcccttggaatggtcctactttgccatctcttc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aggtgggttctgtgtatcaaatccaggtcccttggaatggtcctactttgccatctcttc 565
Query: 368 atccccagctttgttttgcttttggtttttcaaggcagggtttcactgt 416
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atccccagctttgttttgcttttggtttttcaaggcagggtttcactgt 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no123_f07.g1 MSMg01no123_f07.g1 CHROMAT_FILE:
MSMg01no123_f07.g1 PHD_FILE: MSMg01no123_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:32:55 2005
(201 letters)
>mm_chr19_37136721_37137321
Length = 601
Score = 369 bits (191), Expect = e-107
Identities = 197/199 (98%)
Strand = Plus / Minus
Query: 1 ctctaaactgttaacaacatcccttcttagtaccatggagctgtaaatacatggggatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 366 ctctaaactgttaacaacatcccttcttagtaccatggagctgtaaatacacggggatag 307
Query: 61 aaacattggaccaaaatgttttgcttgggtacaacattgtttgaggcatgagtctggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aaacattggaccaaaatgttttgcttgggtacaacattgtttgaggcatgagtctggaat 247
Query: 121 ttaaaatagccaaataacagagctagttccattgctaagttaggggatagagagagagag 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 246 ttaaaatagccaaataacagagctagttccattgctaagttagggggtagagagagagag 187
Query: 181 agggagggagagagagggg 199
|||||||||||||||||||
Sbjct: 186 agggagggagagagagggg 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 601
Length adjustment: 8
Effective length of query: 193
Effective length of database: 593
Effective search space: 114449
Effective search space used: 114449
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
