XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTGG
CAATCCACTGTCTAATGGCAAGAAACCCTTAAAGAAATATCCAACATTTT
AGTCATCTTGGAAATGCAAATCAAAACAACTCTGAGATCCCATTTTACAC
CCATCAGAATGGCTAAGATCAAAAACTCAAGCACATGCTTGCAAGGATGT
GGAACAAGGGGAGCACTCCTCCACTGCTGGTGGGACTGCAGACTTGTACA
ACCACTTTAGAAATCAATTTCGTGGTTTCTCAGAAAACTGATTTACCTCA
GAATAGATTTACCCCAAGGCCCATCGATGCCACTGCTTGACGCATATCCA
AAAGAAGTTACAGGATCCCACAAGGATGCTCGCTCAAGGGTGTTCATAGC
AGCTTTATTCATAATATCCAGAAACTGGAAAGAACTTAGGAGCCTCTCAA
TCAAAGAATGGGTACAGAAAGCATGGTTCATTTACAAAATGGAATACTAC
TCATCTATTAAAAAAACAAAAACAAAAACATCATGAATTTTGCAGACAAA
TGGATGGAACTGGAAAAGGTCATCTTGAGTAAGATAAGATCCAGAAAGAC
AAACATAGTATGTAGTCATGAGTGGATATTCGTCATAAAGTACAAGATAA
GCATACTAGAAACTGCAGACCCAAAGAAGCTAAGTAACAAGAGGGGCCCA
AGGAAGTCCGTTTGAGTCTCACTGAGATNGGGGA

TGTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGGGTAGGGACTCACATAG
GTAGTAATAATTCTTATTTTCCCTATCAAAAATAAACCATAAAACACCAT
CATACTTAAATACAATGCCTCTTGAGGTGTGTTTTATCTTTTGTGTGTGT
GTGTGTGTATATATATATATATATATATATATATATCCACAGTTGACACT
GCTTTATGAGGGTTTAAGTATTCCATAATAATCAAAGACACTTAGGCAGT
TTTTCTTCCTGTAAGTAATTTCAGCTAATAACTCAACCAGACTTAAGTAC
TGCATTTGGGCAAGAAAATAAGGTACTTTAGGATTTATTTGTTATATGTT
AATATCCCAGGGGGAAATGCATTTCCAGGCAAGGAACAAAGAAACAATGG
ATATTCGTGCTAAGGCAGTTTTTCAGCAGCCTTTCCCCATCCAAAGTTCC
TGATCTTTTCTTGTTGTTGCTAAGAACAAACTTGGAAGAACCATTCCTTT
TAAAAATGTATGTGAGTGCATATCTCTTTTAATGTTCAGTTTGAAAAGCC
AAAACTGTCAAACTGAGCACGGGGACCCCAATGGAAGAGTTAGGAGAAGG
ACTGAAGAAGCCGAAGGGAATTGCAACCCCATAGGAAGAACAATAATATC
AACTAACGGAACCCCCCATAGCTCCCAGAACAAAACCACCCAACAAAGA

Query= MSMg01no128_b18.g1 MSMg01no128_b18.g1 CHROMAT_FILE:
MSMg01no128_b18.g1 PHD_FILE: MSMg01no128_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:41:05 2005
         (553 letters)



>mm_chr19_55027394_55028345
          Length = 952

 Score =  891 bits (461), Expect = 0.0
 Identities = 523/553 (94%), Gaps = 17/553 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgggtagggactcacataggtagtaataattcttattttccctatcaaaaataaaccat 60
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 ttggctagggactcacataggtagtaataattcttattttccctatcaaaaataaaccat 834

                                                                       
Query: 61  aaaacaccatcatacttaaatacaatgcctcttgaggtgtgttttatcttttgtgtgtgt 120
           ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| 
Sbjct: 833 aaagcaccatcatacttaaatacaatgccttttgaggtgtgttttgtcttttgtgtgtg- 775

                                                                       
Query: 121 gtgtgtgtatatatatatatatatatatatatatatccacagttgacactgctttatgag 180
                         | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 774 --------------a-atatatatatatatatatattcacagttgacactgctttatgag 730

                                                                       
Query: 181 ggtttaagtattccataataatcaaagacacttaggcagtttttcttcctgtaagtaatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 ggtttaagtattccataataatcaaagacacttaggcagtttttcttcctgtaagtaatt 670

                                                                       
Query: 241 tcagctaataactcaaccagacttaagtactgcatttgggcaagaaaataaggtacttta 300
           |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tcagctaagaactcaaccagagttaagtactgcatttgggcaagaaaataaggtacttta 610

                                                                       
Query: 301 ggatttatttgttatatgttaatatcccagggggaaatgcatttccaggcaaggaacaaa 360
           ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 609 ggatttatttgttatatgttaatatcctagggggaaatgtatttccaggcaaggaacaaa 550

                                                                       
Query: 361 gaaacaatggatattcgtgctaaggcagtttttcagcagcctttccccatccaaagttcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gaaacaatggatattcgtgctaaggcagtttttcagcagcctttccccatccaaagttcc 490

                                                                       
Query: 421 tgatcttttcttgttgttgctaagaacaaacttggaagaaccattccttttaaaaatgta 480
           |||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 489 tgatcttttcttg-ggttgctaagaacaagcttggaagaaccattccttttaaaaatgta 431

                                                                       
Query: 481 tgtgagtgcatatctcttttaatgttcagtttgaaaagccaaaactgtcaaactgagcac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 430 tgtgagtgcatatctcttttaatgttcagtttgaaaagccaaaactgtcaggctgagcac 371

                        
Query: 541 ggggaccccaatg 553
           |||||||||||||
Sbjct: 370 ggggaccccaatg 358


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 952
Length adjustment: 10
Effective length of query: 543
Effective length of database: 942
Effective search space:   511506
Effective search space used:   511506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)