MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-134I03
Chromosome	19 (Build37)
Map Location	45,330,250 - 45,330,773
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC629152, Scd2, Scd4, Scd1, Wnt8b, Sec31b, Ndufb8, Hif1an, Pax2, LOC383450, LOC100042752, 6030443O07Rik, Sema4g, Mrpl43, Peo1, Lzts2, Pdzd7, EG435601, LOC100042760, Sfxn3, Kazald1, Tlx1, Lbx1
Downstream gene	Btrc, EG627889, Poll, 5330431N19Rik, Fbxw4, Fgf8, Npm3, Mgea5, E330018D03Rik, Kcnip2, 9130011E15Rik, EG627939, 4930505N22Rik, Hps6, Ldb1, Pprc1, Nolc1, Elovl3, Pitx3, Gbf1, LOC668094
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC629152 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629152
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Scd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20250 MGI:98240
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329065 MGI:2670997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Scd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20249 MGI:98239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Wnt8b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22423 MGI:109485
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sec31b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240667 MGI:2685187
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufb8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67264 MGI:1914514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hif1an (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319594 MGI:2442345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pax2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18504 MGI:97486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383450 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins pseudo : _no_value

name	LOC100042752 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042752
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	6030443O07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226151 MGI:1924968
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sema4g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26456 MGI:1347047
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mrpl43 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94067 MGI:2137229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Peo1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226153 MGI:2137410
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lzts2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226154 MGI:2385095
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdzd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:212684 MGI:3608325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435601 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435601 MGI:3645766
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100042760 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	Sfxn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94280 MGI:2137679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kazald1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107250 MGI:2147606
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tlx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21908 MGI:98769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lbx1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16814 MGI:104867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Btrc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12234 MGI:1338871
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG627889 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627889 MGI:3649145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 1451 ESTs, 8 Proteins

name	Poll (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56626 MGI:1889000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5330431N19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226162 MGI:1924407
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxw4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30838 MGI:1354698
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fgf8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14179 MGI:99604
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Npm3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18150 MGI:894653
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mgea5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76055 MGI:1932139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E330018D03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320319 MGI:2443808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kcnip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80906 MGI:2135916
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	9130011E15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71617 MGI:1918867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627939 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627939 MGI:3645759
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 986 ESTs, 10 Proteins

name	4930505N22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75056 MGI:1922306
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Hps6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20170 MGI:2181763
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ldb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16825 MGI:894762
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pprc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226169 MGI:2385096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nolc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70769 MGI:1918019
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	Elovl3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12686 MGI:1195976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pitx3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18742 MGI:1100498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gbf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107338 MGI:1861607
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 184 ESTs, 3 Proteins pseudo : _no_value

name	Scd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677862 GeneID:20250 MGI:98240
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stearoyl-Coenzyme A desaturase 2 transcript_id : NM_009128.1

name	Scd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130727 GeneID:329065 MGI:2670997
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stearoyl-coenzyme A desaturase 4 transcript_id : NM_183216.3

name	Scd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130513 GeneID:20249 MGI:98239
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stearoyl-Coenzyme A desaturase 1 transcript_id : NM_009127.3

name	Wnt8b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142389070 GeneID:22423 MGI:109485
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wingless related MMTV integration site 8b transcript_id : NM_011720.2

name	Sec31b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133504850 GeneID:240667 MGI:2685187
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Sec31 homolog B (S. cerevisiae) transcript_id : NM_001033343.1

name	Ndufb8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892869 GeneID:67264 MGI:1914514
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 transcript_id : NM_026061.2

name	Hif1an (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70909331 GeneID:319594 MGI:2442345
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypoxia-inducible factor 1, alpha subunit inhibitor transcript_id : NM_176958.3

name	Pax2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34536824 GeneID:18504 MGI:97486
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired box gene 2 transcript_id : NM_011037.2

name	6030443O07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487014 GeneID:226151 MGI:1924968
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6030443O07 gene transcript_id : NM_001081225.1

name	Sema4g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755461 GeneID:26456 MGI:1347047
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G transcript_id : NM_011976.1

name	Mrpl43 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:55769544 GeneID:94067 MGI:2137229
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosomal protein L43 transcript_id : NM_053164.3

name	Peo1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48976074 GeneID:226153 MGI:2137410
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : progressive external ophthalmoplegia 1 (human) transcript_id : NM_153796.3

name	Lzts2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21703989 GeneID:226154 MGI:2385095
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine zipper, putative tumor suppressor 2 transcript_id : NM_145503.1

name	Pdzd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130455 GeneID:212684 MGI:3608325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PDZ domain containing 7 transcript_id : NM_177605.3

name	EG435601 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270488 GeneID:435601 MGI:3645766
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG435601 transcript_id : XM_487568.5

name	LOC100042760 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270490 GeneID:100042760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : hypothetical protein LOC100042760 transcript_id : XM_001478770.1

name	Sfxn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981487 GeneID:94280 MGI:2137679
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sideroflexin 3 transcript_id : NM_053197.2

name	Kazald1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353193 GeneID:107250 MGI:2147606
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Kazal-type serine peptidase inhibitor domain 1 transcript_id : NM_178929.3

name	Tlx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543873 GeneID:21908 MGI:98769
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : T-cell leukemia, homeobox 1 transcript_id : NM_021901.2

name	Lbx1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891740 GeneID:16814 MGI:104867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ladybird homeobox homolog 1 (Drosophila) transcript_id : NM_010691.5

name	Btrc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373205 GeneID:12234 MGI:1338871
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-transducin repeat containing protein transcript_id : NM_009771.2

name	Btrc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83649722 GeneID:12234 MGI:1338871
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-transducin repeat containing protein transcript_id : NM_001037758.1

name	EG627889 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270559 GeneID:627889 MGI:3649145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 556 ESTs, 4 Proteins product : predicted gene, EG627889, transcript variant 2 transcript_id : XM_001480230.1

name	EG627889 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270557 GeneID:627889 MGI:3649145
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 mRNAs, 1450 ESTs, 8 Proteins product : predicted gene, EG627889, transcript variant 1 transcript_id : XM_001480227.1

name	Poll (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130528 GeneID:56626 MGI:1889000
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), lambda transcript_id : NM_020032.2

name	5330431N19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363411 GeneID:226162 MGI:1924407
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5330431N19 gene transcript_id : NM_172639.2

name	Fbxw4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130948 GeneID:30838 MGI:1354698
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and WD-40 domain protein 4 transcript_id : NM_013907.2

name	Fgf8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22094092 GeneID:14179 MGI:99604
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibroblast growth factor 8 transcript_id : NM_010205.1

name	Npm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679109 GeneID:18150 MGI:894653
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoplasmin 3 transcript_id : NM_008723.1

name	Mgea5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130599 GeneID:76055 MGI:1932139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : meningioma expressed antigen 5 (hyaluronidase) transcript_id : NM_023799.3

name	E330018D03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802104 GeneID:320319 MGI:2443808
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA E330018D03 gene transcript_id : NM_177133.2

name	Kcnip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281736 GeneID:80906 MGI:2135916
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Kv channel-interacting protein 2 transcript_id : NM_145704.1

name	Kcnip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21746188 GeneID:80906 MGI:2135916
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Kv channel-interacting protein 2 transcript_id : NM_030716.2

name	Kcnip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281733 GeneID:80906 MGI:2135916
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Kv channel-interacting protein 2 transcript_id : NM_145703.1

name	9130011E15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:139947659 GeneID:71617 MGI:1918867
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130011E15 gene transcript_id : NM_198296.2

name	EG627939 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270561 GeneID:627939 MGI:3645759
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 986 ESTs, 10 Proteins product : predicted gene, EG627939 transcript_id : XM_894710.3

name	4930505N22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406023 GeneID:75056 MGI:1922306
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930505N22 gene transcript_id : XM_001001649.1

name	Hps6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383223 GeneID:20170 MGI:2181763
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Hermansky-Pudlak syndrome 6 transcript_id : NM_176785.2

name	Ldb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754519 GeneID:16825 MGI:894762
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 1 transcript_id : NM_010697.1

name	Pprc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487054 GeneID:226169 MGI:2385096
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome proliferative activated receptor, gamma, coactivator-related 1 transcript_id : NM_001081214.1

name	Nolc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198328 GeneID:70769 MGI:1918019
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar and coiled-body phosphoprotein 1 transcript_id : NM_001039352.1

name	Nolc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198330 GeneID:70769 MGI:1918019
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar and coiled-body phosphoprotein 1 transcript_id : NM_053086.2

name	Nolc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198332 GeneID:70769 MGI:1918019
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar and coiled-body phosphoprotein 1 transcript_id : NM_001039353.1

name	Nolc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198326 GeneID:70769 MGI:1918019
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleolar and coiled-body phosphoprotein 1 transcript_id : NM_001039351.1

name	Elovl3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671751 GeneID:12686 MGI:1195976
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 transcript_id : NM_007703.1

name	Pitx3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802180 GeneID:18742 MGI:1100498
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paired-like homeodomain transcription factor 3 transcript_id : NM_008852.2

name	Gbf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138535 GeneID:107338 MGI:1861607
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi-specific brefeldin A-resistance factor 1 transcript_id : NM_178930.3

name	Scd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677863 CCDS:CCDS29848.1 GeneID:20250 MGI:98240
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]; GO:0004768 - stearoyl-CoA 9-desaturase activity [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0006636 - fatty acid desaturation [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : stearoyl-Coenzyme A desaturase 2 protein_id : NP_033154.1

name	Scd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38261958 CCDS:CCDS29849.1 GeneID:329065 MGI:2670997
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]; GO:0004768 - stearoyl-CoA 9-desaturase activity [Evidence IDA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IDA]; GO:0006636 - fatty acid desaturation [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 product : stearoyl-CoA desaturase 4 protein_id : NP_899039.2

name	Scd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543675 CCDS:CCDS29850.1 GeneID:20249 MGI:98239
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016717 - oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water [Evidence IEA]; GO:0004768 - stearoyl-CoA 9-desaturase activity [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IMP]; GO:0006636 - fatty acid desaturation [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 note : asebia; stearoyl-CoA desaturase product : stearoyl-Coenzyme A desaturase 1 protein_id : NP_033153.2

name	Wnt8b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756005 GeneID:22423 MGI:109485
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005102 - receptor binding [Evidence TAS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007267 - cell-cell signaling [Evidence TAS]; GO:0007275 - development [Evidence IEA]; GO:0007223 - frizzled-2 signaling pathway [Evidence IEA]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0007165 - signal transduction [Evidence TAS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : wingless related MMTV integration site 8b protein_id : NP_035850.1

name	Sec31b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133504851 GeneID:240667 MGI:2685187
definition	codon_start : 1 product : SEC31-like 2 protein_id : NP_001028515.1

name	Ndufb8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385558 CCDS:CCDS29851.1 GeneID:67264 MGI:1914514
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 protein_id : NP_080337.1

name	Hif1an (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909332 CCDS:CCDS29852.1 GeneID:319594 MGI:2442345
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0004597 - peptide-aspartate beta-dioxygenase activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : hypoxia-inducible factor 1, alpha subunit inhibitor protein_id : NP_795932.2

name	Pax2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34536825 GeneID:18504 MGI:97486
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence TAS] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003700 - transcription factor activity [Evidence TAS] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0001709 - cell fate determination [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0001656 - metanephros development [Evidence IGI]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0009887 - organ morphogenesis [Evidence TAS]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS]; GO:0006350 - transcription [Evidence IEA]; GO:0001657 - ureteric bud development [Evidence IGI] codon_start : 1 exception : unclassified translation discrepancy product : paired box gene 2 protein_id : NP_035167.2

name	6030443O07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487015 GeneID:226151 MGI:1924968
definition	codon_start : 1 product : hypothetical protein LOC226151 protein_id : NP_001074694.1

name	Sema4g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755462 CCDS:CCDS29853.1 GeneID:26456 MGI:1347047
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 product : semaphorin 4G protein_id : NP_036106.1

name	Mrpl43 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17298676 GeneID:94067 MGI:2137229
definition	GO_component : GO:0005762 - mitochondrial large ribosomal subunit [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006412 - protein biosynthesis [Evidence TAS] codon_start : 1 product : mitochondrial ribosomal protein L43 protein_id : NP_444394.1

name	Peo1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24962647 CCDS:CCDS29854.1 GeneID:226153 MGI:2137410
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence ISS] [Evidence IDA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006260 - DNA replication [Evidence IEA]; GO:0006268 - DNA unwinding during replication [Evidence IDA] codon_start : 1 note : T7 gp4-like protein with intramitochondrial nucleoid localization product : twinkle protein_id : NP_722491.2

name	Lzts2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703990 CCDS:CCDS29855.1 GeneID:226154 MGI:2385095
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : putative tumor suppressor LAPSER1 product : leucine zipper, putative tumor suppressor 2 protein_id : NP_663478.1

name	Pdzd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243974 GeneID:212684 MGI:3608325
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : PDZ domain containing 7 protein_id : NP_808273.1

name	EG435601 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270489 GeneID:435601 MGI:3645766
definition	codon_start : 1 product : hypothetical protein protein_id : XP_487568.5

name	LOC100042760 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270491 GeneID:100042760
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478820.1

name	Sfxn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716499 CCDS:CCDS29856.1 GeneID:94280 MGI:2137679
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence ISS] [Evidence IEA] GO_function : GO:0008324 - cation transporter activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006826 - iron ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : sideroflexin 3 protein_id : NP_444427.1

name	Kazald1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725806 CCDS:CCDS29857.1 GeneID:107250 MGI:2147606
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005520 - insulin-like growth factor binding [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0001503 - ossification [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA] codon_start : 1 exception : mismatches in translation product : Kazal-type serine protease inhibitor domain 1 protein_id : NP_849260.1

name	Tlx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11276073 CCDS:CCDS29858.1 GeneID:21908 MGI:98769
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0045165 - cell fate commitment [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0048535 - lymph node development [Evidence TAS]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0048645 - organ formation [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0048536 - spleen development [Evidence IGI] [Evidence IMP] codon_start : 1 product : T-cell leukemia, homeobox 1 protein_id : NP_068701.1

name	Lbx1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059020 CCDS:CCDS29859.1 GeneID:16814 MGI:104867
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0001947 - heart looping [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045665 - negative regulation of neuron differentiation [Evidence IMP]; GO:0048664 - neuron fate determination [Evidence IGI] [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : lady bird-like homeobox 1 homolog product : ladybird homeobox homolog 1 protein_id : NP_034821.2

name	Btrc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83649723 CCDS:CCDS29860.1 GeneID:12234 MGI:1338871
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1; SCF b-TRCP product : beta-transducin repeat containing protein isoform a protein_id : NP_001032847.1

name	Btrc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753210 GeneID:12234 MGI:1338871
definition	GO_function : GO:0016874 - ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; SCF b-TRCP product : beta-transducin repeat containing protein isoform b protein_id : NP_033901.1

name	EG627889 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270560 GeneID:627889 MGI:3649145
definition	codon_start : 1 product : similar to ribosomal protein L6 isoform 2 protein_id : XP_001480280.1

name	EG627889 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270558 GeneID:627889 MGI:3649145
definition	codon_start : 1 product : similar to ribosomal protein L6 isoform 1 protein_id : XP_001480277.1

name	Poll (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910500 CCDS:CCDS29861.1 GeneID:56626 MGI:1889000
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003890 - beta DNA polymerase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence ISS] [Evidence IDA]; GO:0016449 - lambda DNA polymerase activity [Evidence ISS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006287 - base-excision repair, gap-filling [Evidence ISS]; GO:0006260 - DNA replication [Evidence IEA] [Evidence ISS]; GO:0006289 - nucleotide-excision repair [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0016446 - somatic hypermutation of immunoglobulin genes [Evidence ISS] codon_start : 1 note : DNA polymerase lambda product : polymerase (DNA directed), lambda protein_id : NP_064416.1

name	5330431N19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541998 CCDS:CCDS29862.1 GeneID:226162 MGI:1924407
definition	codon_start : 1 product : DPCD protein protein_id : NP_766227.1

name	Fbxw4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14780880 CCDS:CCDS29863.1 GeneID:30838 MGI:1354698
definition	GO_process : GO:0007275 - development [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : F-box protein Fbw4; dactylaplasia product : F-box and WD repeat domain containing 4 protein_id : NP_038935.1

name	Fgf8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22094093 CCDS:CCDS29864.1 GeneID:14179 MGI:99604
definition	GO_function : GO:0005104 - fibroblast growth factor receptor binding [Evidence IEA]; GO:0008083 - growth factor activity [Evidence IEA] GO_process : GO:0045165 - cell fate commitment [Evidence IGI]; GO:0008283 - cell proliferation [Evidence IEA]; GO:0009792 - embryonic development (sensu Metazoa) [Evidence IMP]; GO:0035050 - embryonic heart tube development [Evidence IMP]; GO:0035116 - embryonic hindlimb morphogenesis [Evidence IGI]; GO:0008543 - fibroblast growth factor receptor signaling pathway [Evidence IMP]; GO:0048699 - generation of neurons [Evidence IMP]; GO:0007507 - heart development [Evidence IMP]; GO:0001759 - induction of an organ [Evidence IGI]; GO:0042472 - inner ear morphogenesis [Evidence IGI]; GO:0001822 - kidney development [Evidence IMP]; GO:0035108 - limb morphogenesis [Evidence IGI]; GO:0000165 - MAPKKK cascade [Evidence IMP]; GO:0043066 - negative regulation of apoptosis [Evidence IMP] [Evidence IGI]; GO:0043524 - negative regulation of neuron apoptosis [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IGI]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] [Evidence IGI]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA]; GO:0007435 - salivary gland morphogenesis [Evidence IMP]; GO:0007165 - signal transduction [Evidence IEA]; GO:0001658 - ureteric bud branching [Evidence IMP] codon_start : 1 product : fibroblast growth factor 8 protein_id : NP_034335.1

name	Npm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679110 CCDS:CCDS29865.1 GeneID:18150 MGI:894653
definition	GO_component : GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006457 - protein folding [Evidence IEA]; GO:0006364 - rRNA processing [Evidence IDA]; GO:0009303 - rRNA transcription [Evidence IDA] codon_start : 1 function : putative molecular chaperone product : nucleoplasmin 3 protein_id : NP_032749.1

name	Mgea5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15011884 CCDS:CCDS29866.1 GeneID:76055 MGI:1932139
definition	codon_start : 1 note : nuclear cytoplasmic O-GlcNAcase and acetyltransferase product : meningioma expressed antigen 5 (hyaluronidase) protein_id : NP_076288.1

name	E330018D03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33239385 GeneID:320319 MGI:2443808
definition	codon_start : 1 product : hypothetical protein LOC320319 protein_id : NP_796107.1

name	Kcnip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281737 CCDS:CCDS29868.1 GeneID:80906 MGI:2135916
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant c; potassium channel-interacting protein 2; potassium channel interacting protein 2 product : Kv channel-interacting protein 2 isoform c protein_id : NP_663750.1

name	Kcnip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746189 GeneID:80906 MGI:2135916
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant b; potassium channel-interacting protein 2; potassium channel interacting protein 2 product : Kv channel-interacting protein 2 isoform b protein_id : NP_109641.2

name	Kcnip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281734 GeneID:80906 MGI:2135916
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005216 - ion channel activity [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant a; potassium channel-interacting protein 2; potassium channel interacting protein 2 product : Kv channel-interacting protein 2 isoform a protein_id : NP_663749.1

name	9130011E15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:139947660 GeneID:71617 MGI:1918867
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC71617 protein_id : NP_938038.2

name	EG627939 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998606 GeneID:627939 MGI:3645759
definition	codon_start : 1 product : hypothetical protein protein_id : XP_899803.1

name	4930505N22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406024 GeneID:75056 MGI:1922306
definition	codon_start : 1 product : hypothetical protein LOC75056 protein_id : XP_001001649.1

name	Hps6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28603820 CCDS:CCDS29869.1 GeneID:20170 MGI:2181763
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006996 - organelle organization and biogenesis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : ruby eye product : Hermansky-Pudlak syndrome 6 protein_id : NP_789742.1

name	Ldb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754520 CCDS:CCDS29870.1 GeneID:16825 MGI:894762
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0030274 - LIM domain binding [Evidence IPI]; GO:0003712 - transcription cofactor activity [Evidence IEA] GO_process : GO:0009948 - anterior/posterior axis specification [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0010003 - gastrulation (sensu Mammalia) [Evidence IMP]; GO:0016055 - Wnt receptor signaling pathway [Evidence IMP] codon_start : 1 product : LIM domain binding 1 protein_id : NP_034827.1

name	Pprc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487055 GeneID:226169 MGI:2385096
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : peroxisome proliferative activated receptor, gamma, coactivator-related 1 protein_id : NP_001074683.1

name	Nolc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198329 GeneID:70769 MGI:1918019
definition	GO_component : GO:0015030 - Cajal body [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0030532 - small nuclear ribonucleoprotein complex [Evidence TAS] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0007000 - nucleolus organization and biogenesis [Evidence IDA] codon_start : 1 note : isoform C is encoded by transcript variant 3 product : nucleolar and coiled-body phosphoprotein 1 isoform C protein_id : NP_001034441.1

name	Nolc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198331 GeneID:70769 MGI:1918019
definition	GO_component : GO:0015030 - Cajal body [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0030532 - small nuclear ribonucleoprotein complex [Evidence TAS] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0007000 - nucleolus organization and biogenesis [Evidence IDA] codon_start : 1 note : isoform A is encoded by transcript variant 1 product : nucleolar and coiled-body phosphoprotein 1 isoform A protein_id : NP_444316.2

name	Nolc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198333 GeneID:70769 MGI:1918019
definition	GO_component : GO:0015030 - Cajal body [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0030532 - small nuclear ribonucleoprotein complex [Evidence TAS] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0007000 - nucleolus organization and biogenesis [Evidence IDA] codon_start : 1 note : isoform D is encoded by transcript variant 4 product : nucleolar and coiled-body phosphoprotein 1 isoform D protein_id : NP_001034442.1

name	Nolc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198327 GeneID:70769 MGI:1918019
definition	GO_component : GO:0015030 - Cajal body [Evidence IDA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0030532 - small nuclear ribonucleoprotein complex [Evidence TAS] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0007000 - nucleolus organization and biogenesis [Evidence IDA] codon_start : 1 note : isoform B is encoded by transcript variant 2 product : nucleolar and coiled-body phosphoprotein 1 isoform B protein_id : NP_001034440.1

name	Elovl3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671752 CCDS:CCDS29871.1 GeneID:12686 MGI:1195976
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 note : cold inducible glycoprotein 30 product : elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 protein_id : NP_031729.1

name	Pitx3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679341 CCDS:CCDS29872.1 GeneID:18742 MGI:1100498
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030901 - midbrain development [Evidence IMP]; GO:0048666 - neuron development [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 function : transcription factor note : aphakia product : paired-like homeodomain transcription factor 3 protein_id : NP_032878.1

name	Gbf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138536 CCDS:CCDS29873.1 GeneID:107338 MGI:1861607
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005086 - ARF guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0032012 - regulation of ARF protein signal transduction [Evidence IEA] codon_start : 1 product : golgi-specific brefeldin A-resistance factor 1 protein_id : NP_849261.2

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 3 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 4 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 5 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 6 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 7 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 8 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 9 pseudo : _no_value

name	LOC629152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629152
definition	number : 10 pseudo : _no_value

name	LOC100042752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042752
definition	number : 1 pseudo : _no_value

name	LOC100042752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042752
definition	number : 2 pseudo : _no_value

name	LOC100042752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042752
definition	number : 3 pseudo : _no_value

name	LOC100042752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042752
definition	number : 4 pseudo : _no_value

name	LOC100042752 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042752
definition	number : 5 pseudo : _no_value

name	LOC383450 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270487 GeneID:383450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : similar to 3-phosphoglycerate dehydrogenase pseudo : _no_value transcript_id : XR_033860.1

name	LOC668094 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270562 GeneID:668094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 184 ESTs, 3 Proteins product : similar to U1 snRNP-specific protein C pseudo : _no_value transcript_id : XR_034633.1

clone name	MSMg01-339D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263C15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-448N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341L10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-496G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-235M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318O06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-134I03.T7 (MSMg01no134_i03.b1)	MSMg01-134I03.TJ (MSMg01no134_i03.g1)
ACC	AG341205	AG341206
length	1,057	1,211
length of high quality (start - end)	---	534 (85 - 618)
definition	CHROMAT_FILE: MSMg01no134_i03.b1 PHD_FILE: MSMg01no134_i03.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:49:58 2005	CHROMAT_FILE: MSMg01no134_i03.g1 PHD_FILE: MSMg01no134_i03.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 18:49:59 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GGTCGCTCAGGCGCCCNGNNNAAAAANNNNNNNNNNNNANNCCATGGAGG GGCCNNNNNNNNNAGANNNNANNNNNNNNNANNNNGANANNNAGANAAGA GAANNNAGGAAACCCCCAAAAAGAAAANGGGAAGGNAAGGGAGGNACCAA GAGNCGGGAGNNCCANCCAGGACCCNAAAGCGGGANCACNAGAGNCNAAG AACNGGAGAGCANNNGGGACAACACAGGGAGANCCGGNCNCAGNAAAAAA CCAANACTTTTTTGANGCAGAGAAAGNGGCAAACAGAGCACGGNGCAAAA GGAAACCACNCAGCCAGCAAACAAGCTTTTTTTATTTAAGAAAANCCGNC GCAGAAANGNCGGGAGAAAAAAAGCCCCCCCCCGGNGGNNGGNACNNGNA GAGANANNAANANNCGGGAAGAGGAGANAAGGAGNANCANNGGGGNGGAA GGNCAACCGGAGCNACACAGCGAGNNCCAGGCNACAGGGGCNAGNCAGAA AGCACCGAAAACAAACAGAACGANNCAGANGGACACAAGAACGGANNAAA AACCNAAAACAACGGGGACNCAGAAAAGNCAAGGAAGGCGGAGGCCAGGA AGACAGCNCAGGGGNAAGGGANCGCAGGGACGGCANAAGGACAGGGCACC CCGGNCCACGCGGGACACCCCAGAGCAGGGGGGAAGGGGGGGCGGCGATT TTTTTTTTTTAAAGAACAAGGAAACGGCAACCCCACACAAAGGAAAAGCA CACCAGGGAGGAAAAGCGAGGCCTTTGGTTTTTTTTTTTCAAAAACAAAA AGAAAGGGGGAAAGGAACTGGTGTATTGGAAAGGAGAGGGGACACAGCAA AGCCAGAAAAGAAGAGAAAGGAAAGAAAACGGGAAGAAATCCGACAGGGA GGGGAAAAACACGGCGAAAAAGGACGGAGAGAAAAGAAAAACAGACGACA GGGGAAAAGAAGGGGAAGGACAAAAAAGAGGGGGGAAACGGGAGGGAGGG GGAGAACAAAGATAACACATGGAGAGGAACAAAAAACAGGGACCGGAGAA AAGAAAA	CCTCTCTATTTNTAAACATGGAGGCXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXCCTATAAGGTTCATCTGGNCTCCTAG GATGTCAGACAGACCCGTGGAGGACATGCATGCAAAACAATACACATAAT AAAAATAAACTGAGCGTGGTGGAACCTGCCTTTACTCCTAGCACCCAAGA GTCAGAGGAAGGTGGATCTCTCTGAGTTCTAGGCCAGCCTAGGCTACAGT CTACGTAGTGAGTTCTAGGACAGCGAGGGCTACATAGTGAGACCCTGAGC CTGTCTTTTTTTTTTAAAGGTTTTTTTTTTTTGTTTTGTTTTTGTTTTTT TTAGTTTTTTGAGCCAAGGTTTCTCTGTGTAGCCCTGGCTGACCTTGCAC TCATATTTCCACCTGCTCTGCCTCTCAAATGCTGGGATTAAAGGCATGCG CCACCACTGCCCAGTGAGACCCTGTCTTAAAAAAATAACGGATAATTGAA ATAAAACTAAAATAATTTATAATCCCACCCCTTGGAAGCCCCTGGGGGTG ATATATTGATGAATATTCTTCTAGATCTGTTTGTTTGTTTGTTTTTGAGA CAGGTCTCTCTTCCCTGTCCTGTAACTCACTGTGTAGACTCAACTGGCTT TGATTTCACATAGTCCTCCTGCTGTGTCTTCCTAGTGTTTGGATTAATGG CTAGCTCTCACCACTCCTATATTTTCCTCCCATACCTTCCTGTATATCAG CTTCTTATATTTCCTCTTACTTCATTTTATTTCTAACTTCTCTTCTCCTC TTTCAAACGCTGATATCTCCTTATTTTGATTTTGCTGTAATCCTTGCTTT TAATATCTTTTTTTCTTCTTTTTTTTTTCTTTCTTTTTTATTTACTTTTC TCTTTTATTTACTTTCCATTCCTTATCCTTCTTTTTTATTTTTTTCTTCG TTTCCTAATTTTTATCCTTTTTTTATATTCTTTCCTTATCTTTCTATTTA TTCTATTTCCCCCTCCTTCTCTCTCCTATATTTCTATTTCTTCTCTTCTT CAATTTTCTTTTATTTCCTCTTCTATTTGTAGTTTCTCTTTTCTATTATA TTCTACATTTTTTTCTTTCTATCCTTCTTCTATTATCCCTCTCTTCACTC CTCTCTTTGACTTATTCTGTTTTTATCTTCACCCACTTCTCTTTTATTTC CTTCCTTTTAT
quality values	Open. Hide. 3 3 3 6 6 6 6 6 6 6 6 6 6 6 6 3 0 3 0 0 0 3 23 23 29 3 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 6 6 6 6 7 7 7 7 7 7 8 3 0 0 0 0 0 0 0 0 0 3 17 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 3 3 0 3 0 0 0 3 27 3 0 3 27 27 59 27 27 3 0 0 0 3 25 23 22 11 9 11 11 13 11 9 14 14 16 13 11 11 15 23 23 3 0 3 22 27 59 27 27 3 0 3 25 19 21 8 8 8 3 0 3 27 25 39 39 25 27 3 0 3 7 7 7 7 3 0 0 3 23 3 0 3 17 8 9 10 22 21 29 3 0 3 9 23 23 47 59 23 23 3 0 3 21 3 0 3 8 17 3 0 3 0 3 27 27 27 18 3 0 3 7 7 10 25 15 15 3 0 0 0 3 10 21 25 47 47 50 50 50 50 50 47 47 59 27 23 3 0 3 7 7 3 0 3 0 3 27 3 0 3 27 27 59 59 59 59 23 23 3 0 3 9 9 17 12 16 13 10 10 3 0 3 20 23 37 41 59 59 27 27 3 0 3 27 27 40 36 39 39 59 59 27 27 9 8 6 7 3 0 3 9 19 19 8 6 6 7 7 18 23 59 29 27 3 0 3 27 27 44 41 41 41 25 25 25 25 9 17 10 13 8 8 12 17 17 15 15 7 7 8 18 11 9 9 9 27 27 27 3 0 3 23 3 0 3 8 8 8 10 14 23 3 0 3 0 3 9 9 18 17 22 15 15 9 9 9 10 9 11 11 19 21 34 14 10 8 10 8 13 3 0 3 3 0 0 3 3 0 3 3 0 0 3 0 3 9 9 9 3 0 3 0 0 3 3 0 3 0 0 3 7 7 9 17 29 16 16 15 19 18 23 3 0 3 23 25 25 25 3 0 3 0 3 3 0 0 3 6 6 3 0 3 7 7 17 27 3 0 3 25 21 19 9 9 9 19 21 3 0 3 17 19 8 6 6 15 15 17 3 0 0 3 27 27 25 23 3 0 3 8 6 6 15 19 27 3 0 3 3 0 3 27 27 37 36 36 39 39 25 25 11 11 11 11 11 23 22 36 41 41 41 36 23 22 15 13 13 3 0 0 3 10 8 3 0 3 7 6 8 8 19 19 11 8 8 7 7 7 7 3 0 0 3 9 9 12 17 9 3 0 3 11 19 19 23 10 10 8 7 7 8 6 6 3 0 3 15 7 9 9 7 10 3 0 3 23 23 41 41 41 41 22 15 6 6 8 15 22 34 37 37 37 37 33 33 30 30 30 30 17 21 3 0 3 17 8 8 8 3 0 3 14 7 7 7 3 0 3 9 8 6 6 9 6 8 9 19 19 8 3 0 3 13 20 23 23 11 11 10 12 8 8 8 7 8 9 7 13 3 0 3 15 15 27 18 15 7 7 6 6 8 11 7 9 9 9 18 15 10 9 9 9 9 10 11 13 16 9 9 9 9 12 18 24 19 16 14 13 8 6 6 6 8 8 14 16 15 15 8 8 8 8 8 7 8 7 9 9 9 9 9 9 9 9 9 15 10 10 9 11 9 9 10 8 8 8 13 19 24 21 15 11 10 10 9 9 9 9 8 8 6 6 6 6 8 15 15 8 8 6 6 6 6 7 11 9 10 10 8 13 6 6 8 8 8 8 8 10 10 10 6 6 6 8 7 6 8 8 12 12 12 11 18 24 22 19 9 9 7 8 8 13 10 9 9 9 9 9 8 11 10 8 8 8 9 9 10 8 8 8 8 8 8 8 6 6 6 6 6 6 8 8 13 9 9 9 9 8 8 8 8 10 13 15 10 10 8 8 8 8 8 8 9 9 8 8 6 7 8 8 8 8 10 10 7 7 8 8 10 8 8 8 8 8 8 7 8 9 9 9 10 13 18 13 13 12 10 10 10 10 10 10 11 9 9 12 15 16 10 10 9 10 8 8 6 6 8 8 8 8 8 8 9 7 7 10 10 8 8 8 8 8 9 11 14 12 13 9 9 9 9 9 10 11 10 8 8 8 10 10 8 8 8 8 12 12 10 8 8 6 7 8 8 8 8 8 8 8 7 6 6 6 8 11 8 8 8 10 12 8 11 11 8 13 11 11 13 22 18 13 10 8 8 8 8 8 11 15 17 9 9 9 9 8 8 8 8 8 8 19 19 19 19 13 18 12 10 10 10 8 8 8 11 13 10 10 7 6 8 8 10 9 9 10 9 9 8 8 8 8 8 6 6 8 6 6 8 10 10 10 6 6 8 8 8 8 8 8 8 9 9 9 9 8 11 8 8 8 8 10 9 9	Open. Hide. 10 10 10 9 6 6 6 6 7 8 3 0 3 8 9 6 6 6 6 6 6 6 6 6 8 8 8 13 8 8 8 11 8 8 9 9 16 15 19 21 15 9 9 9 17 19 28 20 24 28 35 36 36 36 37 37 37 35 35 35 36 36 36 36 50 50 50 50 42 47 27 23 9 9 9 13 6 6 6 6 6 6 10 11 17 18 30 31 33 21 21 3 0 3 23 21 33 33 33 33 33 44 44 53 50 50 50 50 47 47 44 27 19 8 8 8 8 8 10 9 10 10 11 16 32 37 47 47 47 47 37 27 21 12 12 13 18 18 32 34 53 53 53 53 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 57 57 57 40 44 57 59 57 68 57 57 57 57 57 57 57 57 57 59 59 59 59 68 68 68 68 68 68 59 59 59 57 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 68 68 68 68 68 68 68 68 68 59 59 57 57 59 59 59 57 59 59 59 59 59 57 57 59 59 68 68 68 59 59 57 54 54 59 59 59 68 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 59 59 48 48 59 59 59 59 59 43 47 57 59 59 59 48 57 48 48 48 50 59 59 59 34 30 28 12 10 9 10 10 11 12 18 13 20 30 32 43 59 59 50 50 57 59 59 57 57 57 57 57 57 59 59 59 57 57 57 59 57 57 57 68 68 68 68 68 59 59 42 32 30 30 20 20 20 32 32 47 59 47 54 57 57 57 48 46 44 57 57 57 44 44 47 57 57 68 68 68 68 68 57 59 57 57 57 57 57 57 59 59 59 48 50 48 48 57 57 57 57 57 57 57 57 57 57 59 59 59 54 54 54 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 50 50 44 44 44 57 44 43 42 43 44 57 57 59 47 35 35 33 42 37 57 57 57 57 68 68 68 57 57 57 57 57 57 57 57 59 59 57 48 48 48 59 44 44 28 28 37 37 44 44 57 44 44 35 35 30 40 30 35 28 32 28 30 28 27 27 19 19 11 15 15 30 30 30 28 28 28 23 26 20 28 28 28 30 35 26 16 9 9 9 13 15 11 11 11 17 16 19 16 14 19 19 22 22 15 15 10 8 8 6 6 8 8 9 9 15 10 11 11 15 23 12 11 11 11 11 10 8 8 8 8 8 8 16 12 15 12 11 11 19 17 15 15 15 23 24 39 39 39 39 39 37 26 17 9 9 9 9 15 14 11 9 9 10 15 10 8 8 8 8 8 8 8 8 8 9 9 9 9 13 13 13 11 10 10 10 9 10 8 8 8 10 12 15 10 10 8 8 9 12 12 12 10 10 10 8 8 8 13 8 8 8 8 8 8 8 8 8 8 9 9 9 12 14 21 19 16 10 10 10 10 11 14 8 8 8 10 10 13 7 6 8 6 10 10 19 17 12 9 9 9 10 8 8 8 8 8 8 8 8 8 11 11 11 11 10 10 11 10 10 9 9 7 7 8 6 6 6 6 8 8 8 8 8 8 10 8 8 8 11 8 8 10 8 9 11 9 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 10 8 10 10 8 8 6 6 8 8 10 10 12 12 8 10 7 9 10 8 10 8 9 12 12 10 10 11 10 10 8 6 6 10 8 8 8 8 8 8 8 8 8 9 8 8 8 8 8 10 11 12 12 10 10 10 9 8 8 8 8 8 8 8 8 8 8 8 8 10 7 7 8 8 8 11 10 15 9 9 9 9 9 9 9 10 12 10 8 8 8 8 8 8 13 15 19 11 11 10 10 8 8 8 13 8 8 8 8 8 10 10 12 12 13 8 6 6 6 8 10 10 15 11 13 13 10 13 10 8 8 8 11 12 14 15 13 15 14 12 10 8 8 8 10 10 10 10 11 13 15 14 13 15 8 6 8 6 6 10 6 8 8 8 8 8 6 7 8 8 9 13 10 10 8 15 8 8 8 8 8 8 8 8 12 8 8 6 6 8 8 10 10 8 16 15 10 8 8 10 8 8 8 8 8 8 8 9 10 10 10 11 10 11 12 12 11 11 8 8 8 8 8 10 10 9 9 8 8 8 8 7 7 7 7 7 10 9 9 11 11 11 12 12 12 10 10 10 9 9 10 8 6 6 8 10 10 7 7 8 8 9 9 10 9 9 9 12 10 10 9 8 8 10 11 12 12 10 10 6 6 8 6 6 6 6 11 11 11 8 8 6 6 8 8 16 8 8 6 6 13 15 8 6 6 8 8 8 10 15 11 8 8 8 8 6 6 8 8 8 8 6 6 8 8 12 9 9 9 9 7 13 8 15 10 10 8 8 6 7 10 8 6 6 8 8 6 6 6 6 8 10 8 8 8 8 8 6 7 10 10 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no134_i03.g1 MSMg01no134_i03.g1 CHROMAT_FILE:
MSMg01no134_i03.g1 PHD_FILE: MSMg01no134_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:49:59 2005
         (534 letters)



>mm_chr19_45330044_45330973
          Length = 930

 Score =  878 bits (454), Expect = 0.0
 Identities = 510/537 (94%), Gaps = 16/537 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcatctggnctcctaggatgtcagacagacccgtggaggacatgcatgcaaaacaataca 60
           |||||||| |||| ||||||||||||||||  |||| |||||||||||||||||||||||
Sbjct: 207 tcatctggcctcccaggatgtcagacagacatgtggtggacatgcatgcaaaacaataca 266

                                                                       
Query: 61  cataataaaaataaactgagcgtggtggaacctgcctttactcctagcacccaagagtca 120
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 267 cataataaaaataaactgagcgtggtggaacctgcttttactcctagcacccaagagtca 326

                                                                       
Query: 121 gaggaaggtggatctctctgagttctaggccagcctaggctacagtctacgtagtgagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaggaaggtggatctctctgagttctaggccagcctaggctacagtctacgtagtgagtt 386

                                                                       
Query: 181 ctaggacagcgagggctacatagtgagaccctgagcctgtc---ttttttttttaaaggt 237
           |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||
Sbjct: 387 ctaggacagcgagggctacatagtgagaccctgagcctgtctttttttttttttaaaggt 446

                                                                       
Query: 238 tttttttttttgttttgtttttgttttttttagttttttgagccaaggtttctctgtgta 297
           |||||||||        ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttttttttt--------ttttt-ttttttttagttttttgagccaaggtttctctgtgta 497

                                                                       
Query: 298 gccctggctgaccttgcactcatatttccacctgctctgcctctcaaatgctgggattaa 357
           |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||
Sbjct: 498 gccctggctgaccttgcactcagaaatccacctgctctgcctctcaaatgctgggattaa 557

                                                                       
Query: 358 aggcatgcgccaccactgcccagtgagaccctgtcttaaaaaaataacggataattgaaa 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aggcatgcgccaccactgcccagtgagaccctgtcttaaaaaaataacggataattgaaa 617

                                                                       
Query: 418 taaaactaaaataatttataatcccaccccttggaagcccctgggggtgatatattgatg 477
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 618 taaaactaaaataatttataatcccatcccttggaagcccctgggggtgatatattgatg 677

                                                                    
Query: 478 aatattcttctagatctgtttgtttgtttgtttttgagacaggtctctcttccctgt 534
           |||||||||||||||||||||||||||||    ||| ||||||||||||||||||||
Sbjct: 678 aatattcttctagatctgtttgtttgttt----ttgcgacaggtctctcttccctgt 730


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 930
Length adjustment: 10
Effective length of query: 524
Effective length of database: 920
Effective search space:   482080
Effective search space used:   482080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information