ATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCACCTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTC
TTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTC
ATTAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCATTGCTGT
TCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTG
ATCCACTTAGATTTGACCCTACTACAAGGAGATAAGTATGGATCGATTCG
CATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAA
TGCTGTCTTTCTTCCACTGGATGGCTCTAGCTCCCTTGTCGAAGATCAAG
TGACCATATGTGTGCGGGTTCATTTCTGTATTTACTATTCTTATTCCTTT
GGTCCACTTGTCTGCTTTCTATTCCCTGTACCATGCAGATTTTATTCTTC
TCGTTTATGTAATATCTCTCCACTACTGTATCGGCTTTTTTCTTCTTTCC
TTTCCTTCTCTTTCTTG

NCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGAGACCCGACACTAGAGTACCACAG
AGCAAAAGCATAGATAGTGACAATGTAAAAACAGACATTTGAACGTTGGT
CACAGATCCAAAAAAAAAAAAAAAATCACAGAGAAGGATGAGATTCAGTA
ACTAACTTGATCTTACTACTACCAGGGTGAAAATAATGACAAAACAAATT
AAAAATAAAATTTCTTTCAAAATAACTTCAGATTATTGCTGAAGAGTTTC
AACTTCCCCCTGGGTCCCTCCCATTGAAACACTGATTTCTTACTGGTTTG
ATCCTCTCCCCTGCTTTCTGCTCATCCCTGTTCATTTTTTTAAATGAAAA
TGGTCTTTGCCAAAACTCCAGGGAAGAAACAGTTCCCATTTCACATTTAA
CACTTCAGCCCCAAGTTCCCTCATACACTCAAGATCCAAACTTTGACAGA
GAAGCGTCGAGTCCTTCTGTCAAGAACTCTTTCTTGCCTACTTTTCTTCT
AGTGCAAAGAGGAATTTTTATTATTCTTTCCTGGGCCTGCAATCCAGCAT
CTTCAGCCTGTGGTTTTGAAGAGCTCATAGCTGCCTCTTACCTAGGCAGT
GCAAGCTTAACCCAGCTAGATTTTGTTACCTCGCCTGCCCTCTGCTGGAC
AGAGGGC

Query= MSMg01no138_c13.g1 MSMg01no138_c13.g1 CHROMAT_FILE:
MSMg01no138_c13.g1 PHD_FILE: MSMg01no138_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:06 2005
         (627 letters)



>mm_chr19_60385882_60386909
          Length = 1028

 Score = 1207 bits (624), Expect = 0.0
 Identities = 627/628 (99%), Gaps = 1/628 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agagacccgacactagagtaccacagagcaaaagcatagatagtgacaatgtaaaaacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagacccgacactagagtaccacagagcaaaagcatagatagtgacaatgtaaaaacag 260

                                                                       
Query: 61  acatttgaacgttggtcacagatccaaaaaaaaaaaaaaaa-tcacagagaaggatgaga 119
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 acatttgaacgttggtcacagatccaaaaaaaaaaaaaaaaatcacagagaaggatgaga 320

                                                                       
Query: 120 ttcagtaactaacttgatcttactactaccagggtgaaaataatgacaaaacaaattaaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcagtaactaacttgatcttactactaccagggtgaaaataatgacaaaacaaattaaa 380

                                                                       
Query: 180 aataaaatttctttcaaaataacttcagattattgctgaagagtttcaacttccccctgg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataaaatttctttcaaaataacttcagattattgctgaagagtttcaacttccccctgg 440

                                                                       
Query: 240 gtccctcccattgaaacactgatttcttactggtttgatcctctcccctgctttctgctc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccctcccattgaaacactgatttcttactggtttgatcctctcccctgctttctgctc 500

                                                                       
Query: 300 atccctgttcatttttttaaatgaaaatggtctttgccaaaactccagggaagaaacagt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atccctgttcatttttttaaatgaaaatggtctttgccaaaactccagggaagaaacagt 560

                                                                       
Query: 360 tcccatttcacatttaacacttcagccccaagttccctcatacactcaagatccaaactt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccatttcacatttaacacttcagccccaagttccctcatacactcaagatccaaactt 620

                                                                       
Query: 420 tgacagagaagcgtcgagtccttctgtcaagaactctttcttgcctacttttcttctagt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgacagagaagcgtcgagtccttctgtcaagaactctttcttgcctacttttcttctagt 680

                                                                       
Query: 480 gcaaagaggaatttttattattctttcctgggcctgcaatccagcatcttcagcctgtgg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcaaagaggaatttttattattctttcctgggcctgcaatccagcatcttcagcctgtgg 740

                                                                       
Query: 540 ttttgaagagctcatagctgcctcttacctaggcagtgcaagcttaacccagctagattt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttgaagagctcatagctgcctcttacctaggcagtgcaagcttaacccagctagattt 800

                                       
Query: 600 tgttacctcgcctgccctctgctggaca 627
           ||||||||||||||||||||||||||||
Sbjct: 801 tgttacctcgcctgccctctgctggaca 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1028
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1018
Effective search space:   628106
Effective search space used:   628106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)