Query= MSMg01no138_e06.b1 MSMg01no138_e06.b1 CHROMAT_FILE:
MSMg01no138_e06.b1 PHD_FILE: MSMg01no138_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:15 2005
(571 letters)
>mm_chr19_29976403_29977373
Length = 971
Score = 1002 bits (518), Expect = 0.0
Identities = 551/562 (98%), Gaps = 2/562 (0%)
Strand = Plus / Minus
Query: 10 tcaactgtgcctccctgtgagagattaccacagctggtcttgttgactgttgattacttc 69
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 620 tcaactgtgcctgcctgtgagagattaccacagctggtcttgttgactgttgattacctc 561
Query: 70 acaacacagtagttgacagtcatatgatgtgtacaggactattttctgagccaatctgtc 129
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 acaacacagtagttgacagtcatatgatgtatacaggactattttctgagccaatctgtc 501
Query: 130 attctcccaagttcagctgtgtcacttgcaacagaccatcacaggtaggcttgtgggttt 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 attctcccaagttcagctgtgtcacttgcaacagaccatcacaggtaggcttgtgggttt 441
Query: 190 attgactgttgagaagtcctcatagaaggagaggcaggggaagtcatgggattcccatcc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attgactgttgagaagtcctcatagaaggagaggcaggggaagtcatgggattcccatcc 381
Query: 250 aagtgtccagccatgcctctccaaccagttgtatataattcttttctaactgcaaatggc 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagtgtccagccatgcctctccaaccagttgtatataattcttttctaactgcaaatggc 321
Query: 310 cccaggaaggggctaaaagtacataggctaggaaggactagggaggggactccatctttg 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cccaggaaggggctaaaagtacataggctaggaaggactagggaggggactccatctttg 261
Query: 370 gagccatggggcactctcatctatgcgggctgcaaaccttctagtgtggctactttatgc 429
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 260 gagccatggggcactctcatctatgcgggctgcaaaccttctagtgtggctgctttatgc 201
Query: 430 tcctaacttcttcctcattgctctgtaagtaagcctgatacacccattggttcctcagag 489
|||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 200 tcctaacttcttccccattgctctgtaagtaagcctaatacactcattggttcctcagag 141
Query: 490 tgaactggtggtgaactgtacctcagtttgtctgcaacgttataaggaagagaggcagac 549
||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 140 tgaac-ggtggcgaactgtacctcagtttggctgcaacgttataaggaagagaggcagac 82
Query: 550 attgcctagtttccccttcacc 571
||||||||||||||||| ||||
Sbjct: 81 attgcctagtttcccct-cacc 61
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_e06.g1 MSMg01no138_e06.g1 CHROMAT_FILE:
MSMg01no138_e06.g1 PHD_FILE: MSMg01no138_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:15 2005
(607 letters)
>mm_chr19_29847989_29848995
Length = 1007
Score = 1131 bits (585), Expect = 0.0
Identities = 603/611 (98%), Gaps = 4/611 (0%)
Strand = Plus / Plus
Query: 1 catgttatccaaggctatcttta----gtgagagctggtctcaaacacaaaaaacaaaat 56
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 197 catgttatccaaggctatctttatctagtgagagctggtctcaaacacaaaaaacaaaat 256
Query: 57 caaacaacattaacaacaaaactcacttaacttgaaaggtatttaaacaaataaacaaca 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 caaacaacattaacaacaaaactcacttaacttgaaaggtatttaaacaaataaacaaca 316
Query: 117 aaacaatgtcaggtggtggtggcccacacctttaagaccagcacttgggaggcagagtca 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aaacaatgtcaggtggtggtggcccacacctttaagaccagcacttgggaggcagagtca 376
Query: 177 ggcaaatctctgagttctaggccagcctggactacagagtgagttccaggacagccgggg 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 377 ggcaaatctctgagttctaggccagcctggactacagagtgagttccaggacagccaggg 436
Query: 237 ctacacagagaaaccctgtctgggaatcaaaaccccaagaccaaaaaccaaaaccaaaag 296
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ctacacagagaaaccctgtctcggaatcaaaaccccaagaccaaaaaccaaaaccaaaag 496
Query: 297 tcaaaaacaaaattggaacttttactgatgaaaattaaaatgtttcagattaaaaagaaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tcaaaaacaaaattggaacttttactgatgaaaattaaaatgtttcagattaaaaagaaa 556
Query: 357 acacactaaatgggattaaaagcaattagaggtagcaaggaaagaaagatcaatgaagtg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 acacactaaatgggattaaaagcaattagaggtagcaaggaaagaaagatcaatgaagtg 616
Query: 417 aaacaaatgaagaggaaactactttaatggagtatttaaaaaatgaccacagaaagaaat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aaacaaatgaagaggaaactactttaatggagtatttaaaaaatgaccacagaaagaaat 676
Query: 477 tatacaagaatgcttagaaataaactgttaatcatataggtatatattcatcaaaacgga 536
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 677 tatacaagaatgcttagaaataaactgttaatcatatgggtatatattcatcaaaacaga 736
Query: 537 atgtttagtttggtgttaaaataagatggctaaactattaatacaaaacaatacaggcaa 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 atgtttagtttggtgttaaaataagatggctaaactattaatacaaaacaatacaggcaa 796
Query: 597 agcatgagggc 607
|||||||||||
Sbjct: 797 agcatgagggc 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
