Query= MSMg01no138_h10.b1 MSMg01no138_h10.b1 CHROMAT_FILE:
MSMg01no138_h10.b1 PHD_FILE: MSMg01no138_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:30 2005
(381 letters)
>mm_chr19_36747392_36748173
Length = 782
Score = 685 bits (354), Expect = 0.0
Identities = 375/382 (98%), Gaps = 1/382 (0%)
Strand = Plus / Plus
Query: 1 gcacattttttt-ctaaacgcagatttcttaggaaggcttttagatcacatttaatgaag 59
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 gcacattttttttctaaacgcagatttcttaggaaggctttgagatcacatttaatgaag 260
Query: 60 ttaaaaatgataacactgattgacattagtcgtaggggacattgttgtgttttgagtgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaaatgataacactgattgacattagtcgtaggggacattgttgtgttttgagtgtg 320
Query: 120 aaatctccccccataggctcacgagtttcaatacttggtccccagctgtcacacttgttt 179
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatctccccccataggctcacgggtttcaatacttggtccccagctgtcacacttgttt 380
Query: 180 gaaaggctatgcatcttttattaggtggaaccttgctgaagaaactgagtcaatgggagc 239
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 gaaaggctatgcatcttttagtaggtggaaccttgctgaagaaactgagtcactgggagc 440
Query: 240 aggctttcagattttgtatcccatctccacttcccatttgtcctctgtgtcctgactggg 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggctttcagattttgtagcccatctccacttcccatttgtcctctgtgtcctgactggg 500
Query: 300 gatgcagggtgaccagttagcttctggttccttccaccctagcttccctgcaatgctggg 359
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 gatgcagggtgaccagttagcttctggttccttccaccctaacttccctgcaatgctggg 560
Query: 360 ataaatctgctcaactttaagc 381
||||||||||||||||||||||
Sbjct: 561 ataaatctgctcaactttaagc 582
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 782
Length adjustment: 9
Effective length of query: 372
Effective length of database: 773
Effective search space: 287556
Effective search space used: 287556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_h10.g1 MSMg01no138_h10.g1 CHROMAT_FILE:
MSMg01no138_h10.g1 PHD_FILE: MSMg01no138_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:30 2005
(300 letters)
>mm_chr19_36907842_36908541
Length = 700
Score = 561 bits (290), Expect = e-164
Identities = 296/300 (98%), Gaps = 4/300 (1%)
Strand = Plus / Minus
Query: 1 ttacgcttactgagaagtttggatgagcggcccccagataaatcaagaaagcgaagaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttacgcttactgagaagtttggatgagcggcccccagataaatcaagaaagcgaagaaag 372
Query: 61 ttcatctcaattctaaagcaacaattggggggtggggtggctgtgattagctccgcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttcatctcaattctaaagcaacaattggggggtggggtggctgtgattagctccgcttcc 312
Query: 121 catagtaaattattagctcagcgctgacgaggatctatacataaatcagcattgcaccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 catagtaaattattagctcagcgctgacgaggatctatacataaatcagcattgcaccgg 252
Query: 181 atgtggtcgaggtgctgatacaaagcatacacatcaaagttttccgaagtttctctctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 251 atgtggtcgaggtgctgatacaaagcatacacatcaaagttttccgaagtt----tctct 196
Query: 241 ctctctctctctgatcaaagaatacaagtgcacaattcattttcgtgtttattgtgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ctctctctctctgatcaaagaatacaagtgcacaattcattttcgtgtttattgtgtttt 136
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
