Query= MSMg01no139_e09.b1 MSMg01no139_e09.b1 CHROMAT_FILE:
MSMg01no139_e09.b1 PHD_FILE: MSMg01no139_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:37 2005
(656 letters)
>mm_chr19_17505106_17506161
Length = 1056
Score = 1195 bits (618), Expect = 0.0
Identities = 643/652 (98%), Gaps = 2/652 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaggcagcttgagaagaacgcattacgtctacacagacaggaggctgggtctt 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaggcagtttgagaagaacgcattacgtctacacagacaggaggctgggtctt 264
Query: 65 aatcacatgggcacacagtgtctttctctgtgaatcacaaagagtaacgacacatttttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatcacatgggcacacagtgtctttctctgtgaatcacaaagagtaacgacacatttttt 324
Query: 125 tttcttctttttttcttttgtatttcagatcagcttgggagactgtacatcatcataagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttcttctttttttcttttgtatttcagatcagcttgggagactgtacatcatcataagc 384
Query: 185 acagatctttttcttgggaaaatggctttgtaggctactgagagcagctcggcctgcttc 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 acagatctttttcttgggaaaatggctttgtagcctactgagagcagctcggcctgcttc 444
Query: 245 tacattctcaaggaagataaatggcatatgcagccagaattacttgtttctatagctgga 304
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacattctcaaggaagacaaatggcatatgcagccagaattacttgtttctatagctgga 504
Query: 305 ctctggaattacatagcaagggatagattcttccatcgacctgacggtgattctttaaag 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 505 ctctggaattacatagcaagggatagattcttccatcgacctgaaggtgattctttaaag 564
Query: 365 ctatcttaagtgaacaatcaaatggattttggagagttcattttaaatgatcaaaaattt 424
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctatgttaagtgaacaatcaaatggattttggagagttcattttaaatgatcaaaaattt 624
Query: 425 gggaacttatcccatgtttatgtgactcatataatgtctgaagtgtttggggccacctgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gggaacttatcccatgtttatgtgactcatataatgtctgaagtgtttggggccacctgt 684
Query: 485 tgctagattcaggggtctccctctctctctctctctctctctcttagcagccatcaaagg 544
||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 685 tgctagattcaggggtctc--tctctctctctctctctcttttttagcagccatcaaagg 742
Query: 545 atgttatttcatgatatgtgacaacgacttgaagttcagatattactgttcatatgaaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atgttatttcatgatatgtgacaacgacttgaagttcagatattactgttcatatgaaaa 802
Query: 605 gtgttgctggagcactgctcactcatttattttgtactgggctccatgtgtg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gtgttgctggagcactgctcactcatttattttgtactgggctccatgtgtg 854
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_e09.g1 MSMg01no139_e09.g1 CHROMAT_FILE:
MSMg01no139_e09.g1 PHD_FILE: MSMg01no139_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:56:37 2005
(624 letters)
>mm_chr19_17588961_17589984
Length = 1024
Score = 1199 bits (620), Expect = 0.0
Identities = 623/624 (99%)
Strand = Plus / Minus
Query: 1 taataccctgcttgtcctccagggtcttggatgatggtcgctgtgttatgaactgtcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 taataccctgcttgtcctccagggtcttggatgatggtcgctgtgttatgaactgtcctt 765
Query: 61 cctggaagttcgaatttaagaagcaatgccatccctgccactacacttgtcaaggatgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 cctggaagttcgaatttaagaagcaatgccatccctgccactacacttgtcaaggatgcc 705
Query: 121 aaggtagtggcccttccaactgcacctcctgtagagcaggtgaggacatttgctgccggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 aaggtagtggcccttccaactgcacctcctgtagagcaggtgaggacatttgctgccggc 645
Query: 181 tccttcctcatcccaacctgtactctcacaaacaagcacttgttttggctcagaaacctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tccttcctcatcccaacctgtactctcacaaacaagcacttgttttggctcagaaacctg 585
Query: 241 caaaagggctgaggttctgagcagacagctgttcatgaaggcatcagtacaacctgaagg 300
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 584 caaaagggctgaggttctgagcagacagctgttcatgaaggcaccagtacaacctgaagg 525
Query: 301 ctcgtttgctgccaggacacaaaaatccttgttcacataagcacacatgttgactcactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctcgtttgctgccaggacacaaaaatccttgttcacataagcacacatgttgactcactg 465
Query: 361 cccctaaggagatgagagaagtgaagagaggtcttctctgggaagcaaaagcagaaagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 cccctaaggagatgagagaagtgaagagaggtcttctctgggaagcaaaagcagaaagta 405
Query: 421 ttaagtgtgtggtcaagtatgacgagcacagtaaagctaagctttgttgtgggagacctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ttaagtgtgtggtcaagtatgacgagcacagtaaagctaagctttgttgtgggagacctg 345
Query: 481 aaaagctagggaattaagcaagacacagatggtccctcaaactagcaatgcattaaaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aaaagctagggaattaagcaagacacagatggtccctcaaactagcaatgcattaaaggt 285
Query: 541 tatgtgaggtctgagagctgagctaagccatttagatggcaaggtaatcaattcactcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tatgtgaggtctgagagctgagctaagccatttagatggcaaggtaatcaattcactcaa 225
Query: 601 gacagatgtgacctttctggtcca 624
||||||||||||||||||||||||
Sbjct: 224 gacagatgtgacctttctggtcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
