Query= MSMg01no143_i17.b1 MSMg01no143_i17.b1 CHROMAT_FILE:
MSMg01no143_i17.b1 PHD_FILE: MSMg01no143_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:08 2005
(634 letters)
>mm_chr19_20274970_20276004
Length = 1035
Score = 938 bits (485), Expect = 0.0
Identities = 530/545 (97%), Gaps = 1/545 (0%)
Strand = Plus / Minus
Query: 91 aagactgcagaaaaaggaagtgatgtttaagtaattccataaaaggcaggaaaaagaagg 150
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 aagactgcggaaaaaggacgtgatgtttaagtaattccataaaaggcaggaaaaagaagg 776
Query: 151 tgagtttaaaacacgaagcaa-taaatacaaatattcaaagatatacacacatcagcttt 209
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 775 tgagtttaaaacatgaagcaattaaatacaaatattcaaagatatacacacatcagcttt 716
Query: 210 aacaaatgctaaatattgaagttcaaatgggcaatctctagtattttaagtttgaaagat 269
|||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 715 aacaaacactaaatattgaagttcaaatgggaaatctctagtattttaagtttgaaagat 656
Query: 270 tttttaataagtcaatattatcaggtgtagttagttttaatggaaaaccctaaaattagt 329
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 655 tttttcataagtcaatattatcaagtgtagttagttttaatggaaaaccctaaaattagt 596
Query: 330 tgggttaatgaccagctatgattttaacactcagctgagtgtccttgcacttacctttcc 389
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 595 tgggttaatgaccagctatgcttttaacactcaactgagtgtccttgcacttacctttcc 536
Query: 390 cacatgctaagagtaattcatgacagttatttggggtggttatttatgggacagaaagag 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cacatgctaagagtaattcatgacagttatttggggtggttatttatgggacagaaagag 476
Query: 450 tggcaagtatggggcctcatccccacagggtgagatacaagctttctgtacagcagattt 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tggcaagtatggggcctcatccccacagggtgagatacaagctttctgtacagcagattt 416
Query: 510 ggaaccatgagcacagcgccactattgccagctgcaggatggcgtcagtaatttggacag 569
|| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 415 gggaccatgagcacagccccactattgccagctgcaggatggtgtcagtaatttggacag 356
Query: 570 tgcttgcatttcagatactgtctacattttcatgacaagagagcttcttgggtaaatatg 629
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 355 tgcttgcatttcagatactgtctacattttcatgacaagagagcttcttggttaaatatg 296
Query: 630 agcta 634
|||||
Sbjct: 295 agcta 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space: 639600
Effective search space used: 639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no143_i17.g1 MSMg01no143_i17.g1 CHROMAT_FILE:
MSMg01no143_i17.g1 PHD_FILE: MSMg01no143_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:08 2005
(607 letters)
>mm_chr19_20143002_20144007
Length = 1006
Score = 1094 bits (566), Expect = 0.0
Identities = 596/606 (98%), Gaps = 1/606 (0%)
Strand = Plus / Plus
Query: 1 cagttatggttatttgacatgcatactatatacataagcatgttcctataatttatgcat 60
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 cagttatggttatttgacatgcatactatatacataagtgtgttcctataatttatgcat 260
Query: 61 aattatgaatagttattgataacttgtagtagaaatataaataatatttatctctgtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattatgaatagttattgataacttgtagtagaaatataaataatatttatctctgtcct 320
Query: 121 accatttgtctagatcatgaatcattattgtgccagctgatttcatttatcatctgacta 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 accatttgtctagatcatgaatcattattgtgccagttgatttcatttatcatctgacta 380
Query: 181 aagtatagtaaattgtatatgctttgttcaatttgtgttttatttttatttaagatgtta 240
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtatactaaattgtatatgctt-gttcaatttgtgttttatttttatttaagatgtta 439
Query: 241 caatctaaatttttgttttccatgttgaattatactgtattgctgtaaaatacttcctta 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caatctaaatttttcttttccatgttgaattatactgtattgctgtaaaatacttcctta 499
Query: 301 atgtgctaacaactcctgaaaaaaaaaaacatttcattgttttgaaatcagttgcagagc 360
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 500 atgtgctaacaactcctgaaaaaaaaaaccatttcattgttttggaatcagttgcagagc 559
Query: 361 ttcattaatggtatgttgtaggcaagtgaacagaattcatgaataagaagttcagatggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttcattaatggtatgttgtaggcaagtgaacagaattcatgaataagaagttcagatggt 619
Query: 421 ctagaatcatggaatttcttatgatttttaaggacttgccacaggtaacacataacaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctagaatcatggaatttcttatgatttttaaggacttgccacaggtaacacataacaaga 679
Query: 481 ggatgctttcatgtaaatgtagattaaaactacaaatgagacgtctgcatggatcacatt 540
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 680 ggatgttttcatgtaaatgtagattaaaactacaaatgagacatctgcatggatcacatt 739
Query: 541 cttagtggtatctaaattgcagtttggggtgaccataacccagccttaagaacaggagat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttagtggtatctaaattgcagtttggggtgaccataacccagccttaagaacaggagat 799
Query: 601 tgtaat 606
||||||
Sbjct: 800 tgtaat 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1006
Length adjustment: 10
Effective length of query: 597
Effective length of database: 996
Effective search space: 594612
Effective search space used: 594612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
