Query= MSMg01no150_p13.b1 MSMg01no150_p13.b1 CHROMAT_FILE:
MSMg01no150_p13.b1 PHD_FILE: MSMg01no150_p13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:40 2005
(628 letters)
>mm_chr19_58569073_58570101
Length = 1029
Score = 1137 bits (588), Expect = 0.0
Identities = 615/624 (98%), Gaps = 1/624 (0%)
Strand = Plus / Minus
Query: 6 gaattcctttagca-taccacaatgctttgaacaaatgtagcagaaagatatttccaaat 64
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gaattcctttagcagaaagacaatgctttgaacaaatgtagcagaaagatatttccaaat 770
Query: 65 gaatgtgcagtttctgaggataccagtaatatatgtaacggtgcttgatctcattagcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gaatgtgcagtttctgaggataccagtaatatatgtaacggtgcttgatctcattagcaa 710
Query: 125 gcagctcaaactcttcagctaccataaaacacaaatcgcaatcagcacattcccagagcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gcagctcaaactcttcagctaccataaaacacaaatcgcaatcagcacattcccagagcc 650
Query: 185 gtatatctgcctgacccgacttctgctctgcagataacaatttcgctttattccatacag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gtatatctgcctgacccgacttctgctctgcagataacaatttcgctttattccatacag 590
Query: 245 aaaaagttctcatcatctctaaattatgcaagaaaggctccagaaagttcacattcttgt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 589 aaaaagttctcatcatctctaaattatgcaagaaaggctccagaaagttcacattcctgt 530
Query: 305 ctgctttccaacattgtatgttggtatatgttctacagcttgggaaatgtgcctttaaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ctgctttccaacattgtatgttggtatatgttctacagcttgggaaatgtgcctttaaaa 470
Query: 365 atcactgacaagctataattaactcattgcaatgaagacagcccccgagaccttcctgta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 atcactgacaagctataattaactcattgcaatgaagacagcccccgagaccttcctgta 410
Query: 425 gaggaggcaggattccacaaagcctttcccagacaacacatgagggagttaagttggtgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gaggaggcaggattccacaaagcctttcccagacaacacatgagggagttaagttggtgc 350
Query: 485 tttgttgtcctgtggttaggatgtgtcagctgacaggatctgaacttcgggaaggttatg 544
||||||||||||||||| |||||||||||| ||| ||||||||||||| |||||||||||
Sbjct: 349 tttgttgtcctgtggtttggatgtgtcagccgacgggatctgaacttcaggaaggttatg 290
Query: 545 tctttaaggaagtggttttttgactctggggcctaaggaacgctcgttcatcttcaaggg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tctttaaggaagtggttttttgactctggggcctaaggaacgctcgttcatcttcaaggg 230
Query: 605 cttcttcccacaccttctgtataa 628
||||||||||||||||||||||||
Sbjct: 229 cttcttcccacaccttctgtataa 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1029
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1019
Effective search space: 629742
Effective search space used: 629742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no150_p13.g1 MSMg01no150_p13.g1 CHROMAT_FILE:
MSMg01no150_p13.g1 PHD_FILE: MSMg01no150_p13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:14:40 2005
(476 letters)
>mm_chr19_58501070_58501945
Length = 876
Score = 833 bits (431), Expect = 0.0
Identities = 459/473 (97%), Gaps = 8/473 (1%)
Strand = Plus / Plus
Query: 2 gtagaagacagttaattagcaggaagccagacttgaacacttaaaaaggcacatcagaga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtagaagacagttaattagcaggaagccagacttgaacacttaaaaaggcacatcagaga 261
Query: 62 aatagtctgaattgacgggacagaataaataagcagctcacaaggaaggcagccgcgaga 121
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aatagtctgaattgacgtgacagaataaataagcagctcacaaggaaggcagccgcgaga 321
Query: 122 atgcaaagccttaggaggcaaattaagcagaaatctgaaagtgaaatgaagatgaactca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atgcaaagccttaggaggcaaattaagcagaaatctgaaagtgaaatgaagatgaactca 381
Query: 182 cactgggacaatatattatgtgatgccaaatgggagaaattaaaaagcaaacctgggcat 241
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cactgggacaatgtattatgtgatgccaaatgggagaaattaaaaagcaaacctgggcat 441
Query: 242 ccaggagatggctcagtgggtgaagtgcctgccaggcaagcataaagatccaagttcaaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccaggagatggctcagtgggtgaagtgcctgccaggcaagcataaagatccaagttcaaa 501
Query: 302 tccccagaacccatgttaaaagccagacgcagtagcaaacatgcacacaggataccgaga 361
|||||||||||||||||||||||||||| |||| || | ||||||||||||||
Sbjct: 502 tccccagaacccatgttaaaagccagac--------aaacgtggagacaggataccgaga 553
Query: 362 agtgcataggccagctagcctggtatcccagcagtcacaagagactgtctcaaacatggt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agtgcataggccagctagcctggtatcccagcagtcacaagagactgtctcaaacatggt 613
Query: 422 ggagacgacaccagagcttgtcctctgatggactcccgtgtctgtgtcatcgg 474
||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggagatgacaccagagcttgtcctctgatggactcccgtgtctgtgtcatcgg 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
