Query= MSMg01no153_o14.b1 MSMg01no153_o14.b1 CHROMAT_FILE:
MSMg01no153_o14.b1 PHD_FILE: MSMg01no153_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:24 2005
(551 letters)
>mm_chr19_38684997_38685947
Length = 951
Score = 1011 bits (523), Expect = 0.0
Identities = 544/551 (98%)
Strand = Plus / Minus
Query: 1 atttctcatggagttttcatatgtcaaccaaaggcaatgatttaaaagactatcaaattg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 751 atttctcatggagttttcatatgtcaaccaaaggcaacgatttaaaagactatcaaattg 692
Query: 61 cctaggggcaaagaaaaacaggaggggtggcgactgcagtggcttcagacctaatgaaga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 691 cctaggggcaaagaaaaacaggaggggtggcgactgcagtggcttcagacctaacgaaga 632
Query: 121 ggacagggagccacattttggcagcagtctgtgtttcctctgttcttgattccacattcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ggacagggagccacattttggcagcagtctgtgtttcctctgttcttgattccacattcc 572
Query: 181 attccagagtctgtgtggagaattccattctcctgagagtatttcaaccaagcacaagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 attccagagtctgtgtggagaattccattctcctgagagtatttcaaccaagcacaagac 512
Query: 241 actgaccaaacacaattccaaagagccaaaaataaaagctttgcaagcaccatgccagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 actgaccaaacacaattccaaagagccaaaaataaaagctttgcaagcaccatgccagtt 452
Query: 301 cgctggagttgttgcaccgactcctacaggaagcaaaccaaagcttccttaccgtgggaa 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 451 cgctggagttgttgcaccgactcctacaggaagcaaaccgaagcttccttaccatgggaa 392
Query: 361 gcttctcgggactgtaagaggacgtcccattggtgacaatctgggaatttcacagcaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcttctcgggactgtaagaggacgtcccattggtgacaatctgggaatttcacagcaaca 332
Query: 421 aataccctttccccagaattccttccggtccacactgcttccttcatctggtcatcagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 aataccctttccccagaattccttccggtccacactgcttccttcatctggtcatcagca 272
Query: 481 atgcaagcattttctttccggtgctacaaccacactcaaaacaaaaccttatagtgatgc 540
| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 271 aggcaagcattttctttctggtgctacaaccacactcaaagcaaaaccttatagtgatgc 212
Query: 541 ttcctacaagc 551
|||||||||||
Sbjct: 211 ttcctacaagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_o14.g1 MSMg01no153_o14.g1 CHROMAT_FILE:
MSMg01no153_o14.g1 PHD_FILE: MSMg01no153_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:24 2005
(430 letters)
>mm_chr19_38596727_38597557
Length = 831
Score = 698 bits (361), Expect = 0.0
Identities = 407/431 (94%), Gaps = 17/431 (3%)
Strand = Plus / Plus
Query: 4 atgtttcctccctcatc-catgggaatttgtttgactctgttagggttgcatgcaggtgt 62
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 atgtttcctccctcatcacatgggaatttgtttgactctgttagggttgcatgcaggtgc 263
Query: 63 tggctgtctactctacagtataatatgcagcactaggaaaaggttcaatgtagttaaaga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggctgtctactctacagtataatatgcagcactaggaaaaggttcaatgtagttaaaga 323
Query: 123 aaaaggacgaagccattaaattaactaagctatttaaaatactacagcttcataaatcaa 182
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaaggacgaagcctttaaattagctaagctatttaaaatactacagcttcataaatcaa 383
Query: 183 agtcttttatgtcaacttatattctactgaacaatttcttactaaagtgaaaccaaagag 242
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 agtcttttatgtcaacttatattctactgaacaatttcttactaaaatgaaaccaaagag 443
Query: 243 atattttctttaagtgtgtactttgtgaggggggaggggacagaaatgttgactaaagat 302
|||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 444 atattttctttaagtgtgtactttgtga------------cagaaatgttgactagagat 491
Query: 303 gcattttggaatatttaaatccactgttaatttctttcctttttttttttttt---ggtc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 492 gcattttggaatatttaaatccactgttaatttctttccttttttttttttttttgggtc 551
Query: 360 tcatatcttctttgtttaccttttggttttgcaattattaatgattttaactgtgttgct 419
||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||
Sbjct: 552 tcatatcttctttgtttaccttttggttttgtaattattaatgattttaattgtgt-gct 610
Query: 420 tttcttctaag 430
|||||||||||
Sbjct: 611 tttcttctaag 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 831
Length adjustment: 9
Effective length of query: 421
Effective length of database: 822
Effective search space: 346062
Effective search space used: 346062
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
