Query= MSMg01no154_g21.b1 MSMg01no154_g21.b1 CHROMAT_FILE:
MSMg01no154_g21.b1 PHD_FILE: MSMg01no154_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:03 2005
(354 letters)
>mm_chr19_58930022_58930775
Length = 754
Score = 623 bits (322), Expect = 0.0
Identities = 347/356 (97%), Gaps = 2/356 (0%)
Strand = Plus / Plus
Query: 1 aagtcatttccttcccatccctttatctctgtctgtttccaacagacccaggcaagcacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtcatttccttcccatccctttatctctgtctgtttccaacagacccaggcaagcacc 260
Query: 61 gtgtattctcatcacaaactcaggaagcaaagtctagctggtgcctgcattccaggggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtattctcatcacaaactcaggaagcaaagtctagctggtgcctgcattccaggggat 320
Query: 121 gttaattctcccaaaccaccatcagtgtggctgaacatctggggaagatagacaccacgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaattctcccaaaccaccatcagtgtggctgaacatctggggaagatagacaccacgg 380
Query: 181 gcttagacaagcctggggaagcagagagggtctgtagcgattatctgtctgggtcaggga 240
|||||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||
Sbjct: 381 gcttagacaagcctggggaagcagagagggtctgtagcgactgtctctctgggtcaggga 440
Query: 241 ccctgttggctggggagtctcctctactcccctaacactctctctctc--tctctctctc 298
|||||||||||||||||||||||||||||||||||||| | | | ||| ||||||||||
Sbjct: 441 ccctgttggctggggagtctcctctactcccctaacacacacacactcactctctctctc 500
Query: 299 tctctctctctctctctctctctctctctctctctctctctctctctctctccctc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctctctctctctctctctctctctctctctctctctctctctctctctctccctc 556
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 79
Number of extensions: 41
Number of successful extensions: 41
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no154_g21.g1 MSMg01no154_g21.g1 CHROMAT_FILE:
MSMg01no154_g21.g1 PHD_FILE: MSMg01no154_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:03 2005
(587 letters)
>mm_chr19_59088137_59089123
Length = 987
Score = 1127 bits (583), Expect = 0.0
Identities = 586/587 (99%)
Strand = Plus / Minus
Query: 1 tcttttttctgaagcctggctggttttcatcattacctccacctgacttatattctagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tcttttttctgaagcctggctggttttcatcattacctccacctgacttatattctagag 728
Query: 61 agactttgccttcttggtgattctacccaccagcatccagaattagaggagtcaggctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agactttgccttcttggtgattctacccaccagcatccagaattagaggagtcaggctac 668
Query: 121 ttatcctgatggctgcctacctcctcatgaggttagttagctgcctttggataatttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ttatcctgatggctgcctacctcctcatgaggttagttagctgcctttggataatttatt 608
Query: 181 cttgaacaaatggcatttaaacttctgctggatgttttagctttcattaactcatgtgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cttgaacaaatggcatttaaacttctgctggatgttttagctttcattaactcatgtgat 548
Query: 241 ttgtttaatcctttcacacagagaagccctttattcctgctttgcaccttagctgatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ttgtttaatcctttcacacagagaagccctttattcctgctttgcaccttagctgatcca 488
Query: 301 gctgaatagaatgtgtagcgtgttcctcccacaggactatggaaatgggactttgctttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gctgaatagaatgtgtagcgtgttcctcccacaggactatggaaatgggactttgctttt 428
Query: 361 gaaaaagagtctcattactttgccttgccgagttgggtatgacataatctactttaagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gaaaaagagtctcattactttgccttgccgagttgggtatgacataatctactttaagcc 368
Query: 421 attgaagtagttgaggttaaataatctttacaagtgatcgagtccaagagtcaattgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 attgaagtagttgaggttaaataatctttacaagtgatcgagtccaagagtcaattgaaa 308
Query: 481 gaatttcaggtattttaaattctctctctcctgggaagctaaacccataggagatattcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaatttcaggtattttaaattctctctctcctgggaagctaaacccataggagatattcc 248
Query: 541 aaaggtgacatttaaaatgggaaatgtgtcactctgatctttctctt 587
|||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 247 aaaggtgacatttaaaatgggaaatgcgtcactctgatctttctctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
