Query= MSMg01no158_f05.b1 MSMg01no158_f05.b1 CHROMAT_FILE:
MSMg01no158_f05.b1 PHD_FILE: MSMg01no158_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:50 2005
(157 letters)
>mm_chr19_9990292_9990847
Length = 556
Score = 282 bits (146), Expect = 5e-81
Identities = 152/154 (98%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 4 ggaattcctgatgccttgtccctttctccttagtctgccacactttcttttgtgaagtag 63
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctgatgccttgtccctttctctttagtctgccacactttcttttgtgaagtag 263
Query: 64 tactttcagaagtcattactgaatatccttagtccttcatagacagtaaatgcaattgct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tactttcagaagtcattactgaatatccttagtccttcatagacagtaaatgcaattgct 323
Query: 124 ctgaatgcccacttgagggagccagaggacaagg 157
|||||||||||||||||||||||||||||||||
Sbjct: 324 -tgaatgcccacttgagggagccagaggacaagg 356
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 157
Length of database: 556
Length adjustment: 8
Effective length of query: 149
Effective length of database: 548
Effective search space: 81652
Effective search space used: 81652
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_f05.g1 MSMg01no158_f05.g1 CHROMAT_FILE:
MSMg01no158_f05.g1 PHD_FILE: MSMg01no158_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:50 2005
(636 letters)
>mm_chr19_10113784_10114819
Length = 1036
Score = 1222 bits (632), Expect = 0.0
Identities = 635/636 (99%)
Strand = Plus / Minus
Query: 1 ttttctgaacatgtccaatctactcctgttccatcttaggctgcagaactcagagagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ttttctgaacatgtccaatctactcctgttccatcttaggctgcagaactcagagagaag 777
Query: 61 gaaaatccatgacgtgtatcacaggcagaccagagcttgaagaaaggagcctcttggttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 gaaaatccatgacgtgtatcacaggcagaccagagcttgaagaaaggagcctcttggttc 717
Query: 121 tctctagtttgaggaactcttgctttgcttagccaggaccaacgagcccaagatattgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tctctagtttgaggaactcttgctttgcttagccaggaccaacgagcccaagatattgcc 657
Query: 181 acaaacaggagctgttcaatccctttctatgaaggctcttcaaaatcctggaacatgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 acaaacaggagctgttcaatccctttctatgaaggctcttcaaaatcctggaacatgttt 597
Query: 241 tcttcttcacacctggggatacaggagccctggccaaagaggatggtaggtactgctgcc 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 596 tcttcttcacacctggggatacaggagccctggccaaagaggatggcaggtactgctgcc 537
Query: 301 cccacatggtcacagtgaggactgggatagagaaagcctatgcttcccagggaatacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cccacatggtcacagtgaggactgggatagagaaagcctatgcttcccagggaatacacc 477
Query: 361 tattgtatccaaacttggatgctcatagggtgtggccttgattcattctcacacctctcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tattgtatccaaacttggatgctcatagggtgtggccttgattcattctcacacctctcg 417
Query: 421 ctcagtaagatgtggctggctcaagagccattcaagggctccttccctgggatcttggcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctcagtaagatgtggctggctcaagagccattcaagggctccttccctgggatcttggcc 357
Query: 481 tcaggtatgggaggcagttaggggtggacaccaaagtggaggctgggcagacttgggaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcaggtatgggaggcagttaggggtggacaccaaagtggaggctgggcagacttgggaga 297
Query: 541 taaaccaaggataggccctaactatgctgccttctctggccatttcagtccagcatggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 taaaccaaggataggccctaactatgctgccttctctggccatttcagtccagcatggag 237
Query: 601 tctacaggtggtagactttccacctgtatctagatg 636
||||||||||||||||||||||||||||||||||||
Sbjct: 236 tctacaggtggtagactttccacctgtatctagatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
