Query= MSMg01no160_e14.b1 MSMg01no160_e14.b1 CHROMAT_FILE:
MSMg01no160_e14.b1 PHD_FILE: MSMg01no160_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:12 2005
(313 letters)
>mm_chr19_4577863_4578575
Length = 713
Score = 600 bits (310), Expect = e-176
Identities = 310/310 (100%)
Strand = Plus / Minus
Query: 4 ggaattcaaggataaatctagctacttagcaagtttgagccaatctatgctctatgatac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggaattcaaggataaatctagctacttagcaagtttgagccaatctatgctctatgatac 302
Query: 64 cctatctcaaaacaaacaaataaaagtctgctgagctgatactagaatcagtaaaataaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctatctcaaaacaaacaaataaaagtctgctgagctgatactagaatcagtaaaataaa 242
Query: 124 atgtgaaatgcttggttgaaatctggctttgatggcccgatgtagctcagtggcagatta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgtgaaatgcttggttgaaatctggctttgatggcccgatgtagctcagtggcagatta 182
Query: 184 cttgtctaccagcaagaccctggctcagtcattccaaacactgccaaaacaaaaagcctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttgtctaccagcaagaccctggctcagtcattccaaacactgccaaaacaaaaagcctg 122
Query: 244 aatttcagacaaacagtaacaacatttatatataagtatatcctatataataaatgtata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatttcagacaaacagtaacaacatttatatataagtatatcctatataataaatgtata 62
Query: 304 tttatactgc 313
||||||||||
Sbjct: 61 tttatactgc 52
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_e14.g1 MSMg01no160_e14.g1 CHROMAT_FILE:
MSMg01no160_e14.g1 PHD_FILE: MSMg01no160_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:12 2005
(287 letters)
>mm_chr19_4529048_4529734
Length = 687
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%)
Strand = Plus / Plus
Query: 1 cttctcatatatctaggggtgactgtcattgagtgacagcaatctaatttgagaagtaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctcatatatctaggggtgactgtcattgagtgacagcaatctaatttgagaagtaca 260
Query: 61 acttgaagtatagtggatcaaacaagtatgttaaggtattcaaatgactgttgttacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttgaagtatagtggatcaaacaagtatgttaaggtattcaaatgactgttgttacaga 320
Query: 121 aatcaggaagtcaccaaaatgtctatcaaaagggggttgttctatatgttattctgtttg 180
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 321 aatcaggaagtcaccaaaatgtctatcagaaggtggttgttctatatgttattctgtttg 380
Query: 181 gaatcatgtgctatggcctttaaaaatagctcttgtacgctaatcaaacagtcactctag 240
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 ggatcatgtgctatggcctttaaaaatagctcttgtacgctaatcagacagtcactctag 440
Query: 241 ttttattaccacagaacaagacctataaaactttcatataaaatagg 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttattaccacagaacaagacctataaaactttcatataaaatagg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
