Query= MSMg01no160_i17.b1 MSMg01no160_i17.b1 CHROMAT_FILE:
MSMg01no160_i17.b1 PHD_FILE: MSMg01no160_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:32 2005
(126 letters)
>mm_chr19_28869805_28870329
Length = 525
Score = 223 bits (115), Expect = 4e-63
Identities = 121/123 (98%), Gaps = 1/123 (0%)
Strand = Plus / Minus
Query: 4 ggaattccacatttctttccgtgaggcttttaattatgaaaataagtatcatctccaaca 63
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaatttcacatttctttccgtgaggcttttaattatgaaaataagtatcatctccaaca 266
Query: 64 aataaataagcaacaggaaagttgtaaaggcagaagtacaacctgtnggcgaagaagagg 123
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 265 aataaataagcaacaggaaagttgtaaaggcagaagtacaacctgt-ggcgaagaagagg 207
Query: 124 aca 126
|||
Sbjct: 206 aca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 525
Length adjustment: 8
Effective length of query: 118
Effective length of database: 517
Effective search space: 61006
Effective search space used: 61006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no160_i17.g1 MSMg01no160_i17.g1 CHROMAT_FILE:
MSMg01no160_i17.g1 PHD_FILE: MSMg01no160_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:32 2005
(287 letters)
>mm_chr19_28689037_28689723
Length = 687
Score = 509 bits (263), Expect = e-148
Identities = 275/279 (98%)
Strand = Plus / Plus
Query: 5 gagcttggtctgagaagatcgtcttctgaattactttaagtgtcacaacatgtgtcagaa 64
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gagcatggtctgagaagatcgtcttctgaattactttaagtgtcacaacatgtgtcagaa 264
Query: 65 cccagcagccaatcaaaatctccgcttgtaccatgactctatggccgtgcgattcaattc 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 cccagcagccaatcaaaatctccacttgtaccatgactctatggccgtgcgattcaattc 324
Query: 125 cccccttatttgctgagcataccctgtgagctggtactgggcacccctggaagaaaaaaa 184
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 325 cccccttatttgctgagcgtaccctgtgagctggtactaggcacccctggaagaaaaaaa 384
Query: 185 caacgctttttttccgaggtccatgagcccctcctgccccagaagaagctagagaaccca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caacgctttttttccgaggtccatgagcccctcctgccccagaagaagctagagaaccca 444
Query: 245 tgtaaaatgccaaaaagggtacatgtgccttctcttttg 283
|||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtaaaatgccaaaaagggtacatgtgccttctcttttg 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
