Query= MSMg01no161_k08.b1 MSMg01no161_k08.b1 CHROMAT_FILE:
MSMg01no161_k08.b1 PHD_FILE: MSMg01no161_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:29 2005
(326 letters)
>mm_chr19_51607341_51608066
Length = 726
Score = 495 bits (256), Expect = e-144
Identities = 277/284 (97%)
Strand = Plus / Minus
Query: 40 gaaggcttgctgcccaggtctgcctcgttcaataaaatactttcatgcacacttgcagca 99
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 523 gaaggcttgctgcccaggtctggctcgttcaataaaatactttcatgcacacttgcagcg 464
Query: 100 gactctgcatgtcctgagctctcctgggttttccacggaaccggggcatcacagaacatt 159
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 463 gactctgcatgtcctgcgctctcctgggtttcccacggaaccggggcatcacagaacatt 404
Query: 160 gtgtggtttatatttactgtatttatatactagtttgttaagactcatggggactaactt 219
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gtgtggtttatatttactgcatttatatactagtttgttaagactcatggggactaactt 344
Query: 220 tccagggatcatccctaaatctgagttgatatatttgaatactgtatttgaaaaatttcc 279
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 343 tccagggatcatccctaaatctgagttgatatatttgaatactatatttgaaaaatttcc 284
Query: 280 aattcctaagcttccccacactcatcacaagcatgttaacaaca 323
|||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 283 aattcctaagctcccccacactcatcacaagcatgttaacaaca 240
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_k08.g1 MSMg01no161_k08.g1 CHROMAT_FILE:
MSMg01no161_k08.g1 PHD_FILE: MSMg01no161_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:29 2005
(114 letters)
>mm_chr19_51464615_51465129
Length = 515
Score = 207 bits (107), Expect = 2e-58
Identities = 113/115 (98%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 1 aatagttttt-gttgttttataatctacgtacttggatagaaaagtcatgagagacagat 59
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagtttttggttgttttataatctacgtacttggatagaaaagtcatgagagacagat 260
Query: 60 gttcattaagtttaaattccaataacaatttctttaaggaactaggtacttactg 114
||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 gttcattaagtttaaattccaataacaatttctttaaggaactgggtacttactg 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 114
Length of database: 515
Length adjustment: 8
Effective length of query: 106
Effective length of database: 507
Effective search space: 53742
Effective search space used: 53742
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
