Query= MSMg01no162_i09.b1 MSMg01no162_i09.b1 CHROMAT_FILE:
MSMg01no162_i09.b1 PHD_FILE: MSMg01no162_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:54 2005
(110 letters)
>mm_chr19_41994918_41995429
Length = 512
Score = 155 bits (80), Expect = 9e-43
Identities = 101/112 (90%), Gaps = 10/112 (8%)
Strand = Plus / Minus
Query: 5 gaattcctccgtctgggctacataaaactgtcaaaaaaaaatagagagag----agagaa 60
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 312 gaattcctccgtctgggctacataaaactgtcaaaaaaaaagagagagagggagagagaa 253
Query: 61 agggatgcggagccct--agggttctctctgggccagtgtgcaatgacatgg 110
|||||||||||| | ||||||||||||||||||||||| ||||||||||
Sbjct: 252 agggatgcggag---tttagggttctctctgggccagtgtg-aatgacatgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 110
Length of database: 512
Length adjustment: 8
Effective length of query: 102
Effective length of database: 504
Effective search space: 51408
Effective search space used: 51408
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no162_i09.g1 MSMg01no162_i09.g1 CHROMAT_FILE:
MSMg01no162_i09.g1 PHD_FILE: MSMg01no162_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:29:55 2005
(282 letters)
>mm_chr19_41863243_41863924
Length = 682
Score = 391 bits (202), Expect = e-113
Identities = 205/206 (99%)
Strand = Plus / Plus
Query: 77 aaaaataagaacctgaaggtgattgtcaaatcatgacaattatcactagagttgatatag 136
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 277 aaaaataagaacctgaaggtgattgtcaaatcatgacaattattactagagttgatatag 336
Query: 137 gatataatctttttttcttttctttaacatttttaataattcatgtctttccatgtgtat 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gatataatctttttttcttttctttaacatttttaataattcatgtctttccatgtgtat 396
Query: 197 gtgtgtgggttacacatatgtggtggtgcatatgtatgaggctatggtctttgaatgttt 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gtgtgtgggttacacatatgtggtggtgcatatgtatgaggctatggtctttgaatgttt 456
Query: 257 aaatatttcagcctgcctaatgattc 282
||||||||||||||||||||||||||
Sbjct: 457 aaatatttcagcctgcctaatgattc 482
Score = 159 bits (82), Expect = 2e-43
Identities = 88/90 (97%)
Strand = Plus / Plus
Query: 2 ttccaaatttgatgtcagatcgtgaattcctggaggcataaacccttcttatttaagcac 61
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 ttccaaatttgatgtcagatcgtgaattcctggaggcataaacttttcttatttaagcac 60
Query: 62 actgatatttaatttaaaaataagaacctg 91
||||||||||||||||||||||||||||||
Sbjct: 61 actgatatttaatttaaaaataagaacctg 90
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
