Query= MSMg01no162_l09.b1 MSMg01no162_l09.b1 CHROMAT_FILE:
MSMg01no162_l09.b1 PHD_FILE: MSMg01no162_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:09 2005
(332 letters)
>mm_chr19_42942333_42943069
Length = 737
Score = 574 bits (297), Expect = e-168
Identities = 315/323 (97%), Gaps = 7/323 (2%)
Strand = Plus / Plus
Query: 5 gaattcttacagctctgccaggtagctaatgaaaagttcagtttttcacatgtagaaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttacagctctgccaggtagctaatgaaaagttcagtttttcacatgtagaaaat 264
Query: 65 tggtgctcagagagaaaatacatactgtacaggagacggtggcatcctcgggactgtggc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tggtgctcagagagaaaatacatactgtacaggagacggtggcatcctcgggactgtggc 324
Query: 125 tgagaactgaattctgacgatgaccttcctcttagagagagttttttt--cttttttttt 182
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 tgagaactgaattctgacgatgaccttcctcttagagagagtttttttttcttttttttt 384
Query: 183 ---gttttgtttttctgtagctgaaac-ggattggacatgcaacacttaccacaaagcct 238
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 385 tttgttttgtttttctgtagctgaa-ctggattggacatgcaacacttaccacaaagcct 443
Query: 239 accaccttagaacacagagggtctggcatggtgactgatcatggggaacatttagtgatc 298
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 accaccttagaacacagaggatctggcatggtgactgatcatggggaacatttagtgatc 503
Query: 299 gtctctccaggggcctcagacca 321
|||||||||||||||||||||||
Sbjct: 504 gtctctccaggggcctcagacca 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 737
Length adjustment: 9
Effective length of query: 323
Effective length of database: 728
Effective search space: 235144
Effective search space used: 235144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no162_l09.g1 MSMg01no162_l09.g1 CHROMAT_FILE:
MSMg01no162_l09.g1 PHD_FILE: MSMg01no162_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:09 2005
(295 letters)
>mm_chr19_43102885_43103578
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%), Gaps = 1/294 (0%)
Strand = Plus / Minus
Query: 1 tccttatgaaagatgatcatattattttcaccttaacgatttaaggaaacaaacaaataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tccttatgaaagatgatcatattattttcaccttaacgatttaaggaaacaaacaaataa 509
Query: 61 tttaaaaaaaattatcagttaaaagggaaattattttgaattgtctattgaggttctatt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttaaaaaaaaattatcagttaaaagggaaattattttgaattgtctattgaggttctatt 449
Query: 121 ttttttcataattacctgcataccccatacccctcaaaaatgggcacagaattttctttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttttttcataattacctgcataccccatacccctcaaaaatgggcacagaattttctttt 389
Query: 181 ttaacctttaactagtttgtattttaaatagcatggaaaatattcaaaacagattggctc 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 388 ttaacctttaactagtttgtattttaaatagcatgg-aaatattcaaaacagattggctc 330
Query: 241 acagaaccattgtcatgctgggaatgttgaaagaaaagagccagtgagatggtt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acagaaccattgtcatgctgggaatgttgaaagaaaagagccagtgagatggtt 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 694
Length adjustment: 9
Effective length of query: 286
Effective length of database: 685
Effective search space: 195910
Effective search space used: 195910
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
