AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGGGCTGGGTGCCTGACAGGCATATATCCTTACAAGCTGAACCACAT
CCCTAGCCCCAGAACTGACCTCTTAATAATATCAGGCCCTCTGATCTTTG
AGCCAATCTGTTACTTAGCCCTCTCTAATTCTTTTCAATAGTGCTTTGGA
GTTTTTGAAATACATGTGAAATTTATTTCTACGTCAAAATTATTCTACGT
CATATCTTAGACACTGTTGAAAATGGTTTTGTTGGGGGGGGTTCAGTCTT
TAATTGCTTGTGTAACCTTTATAAACTCGCTTCTAGTACCATGTCTGTGA
ATATTATATCTTTACTTGGTATCTGACTGCCATTTGTTATTATTTTAATA
TAAATCATGTTCCACGGCTTCATGTGCTAAAGCCTGTCTCTAGCTGGTAG
TATCTGGAAGCATGATGAAAACCTTGTTAGGTGACCCAGTAGGAGTCAGT
AGGTCAGTAAGGGAGGACCCTTCAGTCCCTTCCTGCTGCTGTGTTCCTGT
CTGTCATGGTCTGAGTTGCAGGCTCCAAGCCTTCTCAGCCGTGAACAGGA
ATGTTTGAAACCATGGGCAAACCCCACCTTTCCCGAACCTCATGCTCCTT
CTGGTAGGTATTTGATCATTGGTTTATCCAGTCTGCATTTCTTCCCAGTG
ATACCGGCTAAGACCCCCAGTAT

NAAAACCCCCNNAAAGACGGAGCCTGGGGCGCCGGCGCTCAXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCGAAATTACTTTAATAAATAATA
CCGAATGGGGATTTGAAGACCTACAAAATACGTTTTTGCTGGNAANCAAA
TCTCCACGTTTTGTAAATTAGACCTTAGAAGAAAGTCTGTGCTGTTCACA
AGCACAGAGGAAGAAATCACTGAAGGTTGGCGGCCTTCAAAGAGGAGGAA
AGAATTCTACGACAGCGGGCACACGAAAGCGTGCAGCCTCTCCACCACTT
CATACAAGATCAGGCAGAAGATAAAATGGCGCCTTAAACAGGGAACTCTA
TTCTAACACCAGGCATCTCTGACTAAGACCCTTTCAAACAAGGCACGTGC
GCCGCAAGAAACAGGGTACCAAATTCCTCATAAACCCTGGTGGATTTCGT
CCTCCTCTTAGGAGACCTACAAGGTTTCCCAAGAGAAGCTGTGACCACAT
TGGACTTTAACTGATACCAGCCTTTGATTACCGCACACTAGTCCATCCCA
TCCCCGACTAAGATTTTGTGAAACCCAGGGCCGAGTTTACTTAAGGGCGG
GGGGGGGGGGGGCCCACCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCTCCCT
CCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCTCCCT
CCTCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCC
TCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCCCCC
CCCCCCCCCCTCCCCCCCTCCCCCCCCTCCCCCCCCCCCCCCCCCCCCCC
CCCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCCCCCCCC
CCCCCCCCTCCCCCCCCCCCTCCCCCCCCGTCCCCCCCCCCCCCCCCCCC
CCCCCCCTCCCCTCTCCTCCTCTCTCCTCCTCCCCCCTCTCTCCCCTCCC
CCCCTCCTCTTCCCCTGCTCCCCCCTCCCTCCCCTCTC

Query= MSMg01no165_a06.b1 MSMg01no165_a06.b1 CHROMAT_FILE:
MSMg01no165_a06.b1 PHD_FILE: MSMg01no165_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:01 2005
         (658 letters)



>mm_chr19_36275475_36276534
          Length = 1060

 Score = 1203 bits (622), Expect = 0.0
 Identities = 647/656 (98%), Gaps = 2/656 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagggctgggtgcctgacaggcatatatccttacaagctgaaccacatccctagc 64
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagggctgggtgcatgacaggcatatatccttacaagctgaaccacatccctagc 264

                                                                       
Query: 65  cccagaactgacctcttaataatatcaggccctctgatctttgagccaatctgttactta 124
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 cccagaactgacctcttaataatatcaagccctctgatctttgagccaatctgttactta 324

                                                                       
Query: 125 gccctctctaattcttttcaatagtgctttggagtttttgaaatacatgtgaaatttatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gccctctctaattcttttcaatagtgctttggagtttttgaaatacatgtgaaatttatt 384

                                                                       
Query: 185 tctacgtcaaaattattctacgtcatatcttagacactgttgaaaatggttttgttgggg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctacgtcaaaattattctacgtcatatcttagacactgttgaaaatggttttgttgggg 444

                                                                       
Query: 245 gggg--ttcagtctttaattgcttgtgtaacctttataaactcgcttctagtaccatgtc 302
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggggggttcagtctttaattgcttgtgtaacctttataaactcgcttctagtaccatgtc 504

                                                                       
Query: 303 tgtgaatattatatctttacttggtatctgactgccatttgttattattttaatataaat 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgaatattatatctttacttggtatctgactgccatttgttattattttaatataaat 564

                                                                       
Query: 363 catgttccacggcttcatgtgctaaagcctgtctctagctggtagtatctggaagcatga 422
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catgttccacgggttcatgtgctaaagcctgtctctagctggtagtatctggaagcatga 624

                                                                       
Query: 423 tgaaaaccttgttaggtgacccagtaggagtcagtaggtcagtaagggaggacccttcag 482
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 625 tgaaaaccttgttaggcgacccagtaggagtcagtaggtcagtaagggaggaccctttag 684

                                                                       
Query: 483 tcccttcctgctgctgtgttcctgtctgtcatggtctgagttgcaggctccaagccttct 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 685 tcccttcctgctgctgtgttcctgtctgtcatggtctgagttgcaggctccaagcctcct 744

                                                                       
Query: 543 cagccgtgaacaggaatgtttgaaaccatgggcaaaccccacctttcccgaacctcatgc 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cagccgtgaacaggaatgtttgaaaccatgggcaaaccccacctttcccgaacctcatgc 804

                                                                   
Query: 603 tccttctggtaggtatttgatcattggtttatccagtctgcatttcttcccagtga 658
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 805 tccttctggtaggtatttgatcattggcttatccagtctgcatttcttcccagtga 860


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1060
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1050
Effective search space:   680400
Effective search space used:   680400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)