Query= MSMg01no169_g01.b1 MSMg01no169_g01.b1 CHROMAT_FILE:
MSMg01no169_g01.b1 PHD_FILE: MSMg01no169_g01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:03 2005
(329 letters)
>mm_chr19_43844933_43845661
Length = 729
Score = 569 bits (294), Expect = e-166
Identities = 315/322 (97%)
Strand = Plus / Plus
Query: 5 gaattccttgagatttaataacaaattcaggttgtttaaaagaccaaacatccatctcgc 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 205 gaattccttgagatttaataacaaactcaggttgtttaaaagaccaaacatccatctggc 264
Query: 65 tcctcaccttccaggtcaagttgtcatctttaaggtactttggtttgtggattttgtaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcctcaccttccaggtcaagttgtcatctttaaggtactttggtttgtggattttgtaca 324
Query: 125 aaggacagtactcgtgggcaagcagacataccggggatcgtttcttacctcgcaatgtaa 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 aaggacagtactcgtgggcaagcagacatactggggatcgtttcttacctcgcaatgtaa 384
Query: 185 tcagaagaaagctaactatctgagtcttaacttcctcattcctaaatcaggaaggaataa 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagaagaaagctaactatttgagtcttaacttcctcattcctaaatcaggaaggaataa 444
Query: 245 aaactaaactatagtttctggctaaatgatatattaaaacaccaggcacgtaggaaatac 304
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 445 aaactaaactatagtttctggctaaatgatatattaaaacaccaggcacgtaagaaatac 504
Query: 305 tcattatttatttttttctccc 326
| |||||||||| |||||||||
Sbjct: 505 ttattatttattcttttctccc 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_g01.g1 MSMg01no169_g01.g1 CHROMAT_FILE:
MSMg01no169_g01.g1 PHD_FILE: MSMg01no169_g01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:03 2005
(143 letters)
>mm_chr19_44011179_44011723
Length = 545
Score = 246 bits (127), Expect = 5e-70
Identities = 140/145 (96%), Gaps = 2/145 (1%)
Strand = Plus / Minus
Query: 1 agtggaaagttccaagcaattggataggaaagagcgtgtgggggtgatgtcactgttcgc 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 345 agtggaaagttccaagcaattgtataggaaagagcgtgtgggggtgatgtcactgttcgc 286
Query: 61 acagacagacgggggttgggggggggg--agaaagacctctgctgaaatgtttcctgatc 118
||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||
Sbjct: 285 acagacagacgggggttggggggggggggagaaagacctctgctgagatgtctcctgatc 226
Query: 119 tctgacttgaggggagagtaggagg 143
|||||||||||||||||||||||||
Sbjct: 225 tctgacttgaggggagagtaggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 143
Length of database: 545
Length adjustment: 8
Effective length of query: 135
Effective length of database: 537
Effective search space: 72495
Effective search space used: 72495
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
