Query= MSMg01no174_l19.b1 MSMg01no174_l19.b1 CHROMAT_FILE:
MSMg01no174_l19.b1 PHD_FILE: MSMg01no174_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:40 2005
(323 letters)
>mm_chr19_28503806_28504527
Length = 722
Score = 571 bits (295), Expect = e-167
Identities = 313/319 (98%), Gaps = 1/319 (0%)
Strand = Plus / Plus
Query: 5 gaattcaatgaggggtaatttacacaatatgattacaccttcttggtccaatttcattct 64
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatgaggggtcatttacacaatatggttacaccttcttggtccaatttcattct 264
Query: 65 tcttcaagtctagagtggccacaaatacactatctgctcctgtgatcatcctactttggc 124
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcttcaagtctagagtggg-acaaatacactatctgctcctgtgatcatcctactttggc 323
Query: 125 ccttatgggtagttctccttagtctctgtggggacaagctcagcaatgccctgcagcaag 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 324 ccttatgggtagttctccttagtctctgtggggacaagctcagcagtgccctgcagcaag 383
Query: 185 acttgggtcctatcccccagaactgtgaataaatcatctcgttgaatgctgaaagagact 244
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 acttgggtcctatcccccagaactgtgaataaatcatctcattgaatgctgaaagagact 443
Query: 245 tggcagctatggttaaactctgactgatctgaggctgagaccttgaaattaacctaatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggcagctatggttaaactctgactgatctgaggctgagaccttgaaattaacctaatga 503
Query: 305 actggaccattcaggttta 323
|||||||||||||||||||
Sbjct: 504 actggaccattcaggttta 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_l19.g1 MSMg01no174_l19.g1 CHROMAT_FILE:
MSMg01no174_l19.g1 PHD_FILE: MSMg01no174_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:41 2005
(293 letters)
>mm_chr19_28668485_28669177
Length = 693
Score = 505 bits (261), Expect = e-147
Identities = 284/299 (94%), Gaps = 13/299 (4%)
Strand = Plus / Minus
Query: 1 tgaagagtggcttggcgtcactgggaccagtcagctttggggacgtgctgcctttttttt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 579 tgaagagtggcttggcgtcactgggaccagtcagctttggggacgtgctggctttttttt 520
Query: 61 ttttttttt--gtcttggaacc-----------cttgattcatctgtgctgagtgcagtt 107
||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 519 ttttttttttaatcttggaacccattcatacgtcttgattcatctgtgctgagtgcagtt 460
Query: 108 tcagagaggaaaaataaacatctcagacaccctaggagagagacatcacagagaattcct 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tcagagaggaaaaataaacatctcagacaccctaggagagagacatcacagagaattcct 400
Query: 168 tatcttgtttcctggatgctggctttccggatttgttcagtcttagtgtgctttcaaggt 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tatcttgtttcctggatgctggctttccggatttgttcagtcttagtgtgctttcaaggt 340
Query: 228 ttccctttgcattttgggaaaatgacaggctggggctggggcatgagggtgtgtgtgtg 286
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttccctttgcattttgggaaaatgacaggctggggctggggcatgagggtgtgtgtgtg 281
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
