ATCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTCACTTCTGAGCCCCATTTTTTAATGGGGTTATTTGA
TTTTCTGAAGTCCACCTTTTTGCCCTCTTTATATATGTTGGATATTAGTC
CCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGT
CTTTTTGTTTTACTGACGGTGTCTTTTGCCTAGCAGAAACTTTGGAGTTT
CATTAGGTCCCATTTGTCAATTCTCGATCTTACAGTACAAGCCATTGCTG
TTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCC
ACTTTCTCTTCTATAAGTTTCACTGCCTCTGGTTTTATGTGAAGTTCCTT
GATCCACTTAGATTTGACCTTAATACAAGGAGATAAGTATGGATCTGGAT
CGATTCGCATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTG
TTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCACCCTTGTCGAA
GATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTAT
TCCATTGGTCTACTTGTCTGTCTCTATACCAGTATTATGCAGTTTTTATC
ACAATTGCTCTGTAGTAAAGCTTTAGGTCAGGTTTGGTGATTCCACCACA
GGTT

TTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATGGCACAAAAAGTTGGTTCTTTGAGA
AAATGAACAACATAGACAAACCCCTATCCAAGCTTTAAAACACACAGAGG
GAATATCTAAATTAAGAAAATTAAAAACTAAAAGGCAGGGCATACCATGA
AACACAAAGGAAATCTAGAGAATCTTAAAGACATACTTTAAAAATGTGTA
CTCCACCAAATTGGAAAATCTAAATAAATGGATACTTCTCTTGATAGTTA
CCACTTACCAAAGGGATATGATAAAATGGTTACTGTAAGTTGCTATTCAG
TAATAACCCCTGATGTAGGCAAAGCCTTCCTCACCTTCAGCTAGGTTTCA
GACTCTCTCTAAGGCTGGGAAGGGTAAGGGTGGCACTATGGGCTCCATTC
TGAGGCTACCATTATGGGGAACTGATTTCAGACGTGTGTGATCCCAGTGG
AGGTGTTTATTTAAAGACACACACTTTAAACATATTCGTGTTAAAGACAT
GTGACTGGCAATTAAACAGCAAATAGTTTAATTTGAACGTTTTAAAATGT
GTTTTGAAGATCTTTAATGTTCACTTTGTGGATACATTAATAAACGAGAT
ACCTTATGTATCAATATAAGGAACTAATCTCTTACCAACTAATTGGTAGC
TAGCTGCCAATCCATACTCTCTTTCTCTCTTTCTTCTTTTGGA

Query= MSMg01no181_l17.g1 MSMg01no181_l17.g1 CHROMAT_FILE:
MSMg01no181_l17.g1 PHD_FILE: MSMg01no181_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:16 2005
         (668 letters)



>mm_chr19_49935596_49936662
          Length = 1067

 Score = 1191 bits (616), Expect = 0.0
 Identities = 625/628 (99%), Gaps = 1/628 (0%)
 Strand = Plus / Minus

                                                                        
Query: 41   agacaaacccctatccaagctttaaaacacacagagggaatatctaaattaagaaaatta 100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1067 agacaaacccctatccaagctttaaaacacacagagggaatatctaaattaagaaaatta 1008

                                                                        
Query: 101  aaaactaaaaggcagggcataccatgaaacacaaaggaaatctagagaatcttaaagaca 160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 aaaactaaaaggcagggcataccatgaaacacaaaggaaatctagagaatcttaaagaca 948

                                                                        
Query: 161  tactttaaaaatgtgtactccaccaaattggaaaatctaaataaatggatacttctcttg 220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947  tactttaaaaatgtgtactccaccaaattggaaaatctaaataaatggatacttctcttg 888

                                                                        
Query: 221  atagttaccacttaccaaagggatatgataaaatggttactgtaagttgctattcagtaa 280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887  atagttaccacttaccaaagggatatgataaaatggttactgtaagttgctattcagtaa 828

                                                                        
Query: 281  taacccctgatgtaggcaaagccttcctcaccttcagctaggtttcagactctctctaag 340
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 827  taacccctgatgtaggcaaagccttcctcaccttcagctgggtttcagactctctctaag 768

                                                                        
Query: 341  gctgggaagggtaagggtggcactatgggctccattctgaggctaccattatggggaact 400
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 767  gctgggaagggtaagggtggcactatgggctccattcagaggctaccattatggggaact 708

                                                                        
Query: 401  gatttcagacgtgtgtgatcccagtggaggtgtttatttaaagacacacactttaaacat 460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707  gatttcagacgtgtgtgatcccagtggaggtgtttatttaaagacacacactttaaacat 648

                                                                        
Query: 461  attcgtgttaaagacatgtgactggcaattaaacagcaaatagtttaatttgaacgtttt 520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647  attcgtgttaaagacatgtgactggcaattaaacagcaaatagtttaatttgaacgtttt 588

                                                                        
Query: 521  aaaatgtgttttgaagatctttaatgttcactttgtggatacattaataaacgagatacc 580
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587  aaaatgtgttttgaagatctttaatgttcactttgtggatacattaataaacgagatacc 528

                                                                        
Query: 581  ttatgtatcaatataaggaactaatctcttaccaactaattggtagctagctgccaatcc 640
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 527  ttatgtatcaatataaggaactaatctcttaccaactaattggtagcta-ctgccaatcc 469

                                        
Query: 641  atactctctttctctctttcttcttttg 668
            ||||||||||||||||||||||||||||
Sbjct: 468  atactctctttctctctttcttcttttg 441


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1067
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1057
Effective search space:   695506
Effective search space used:   695506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)