Query= MSMg01no181_o08.b1 MSMg01no181_o08.b1 CHROMAT_FILE:
MSMg01no181_o08.b1 PHD_FILE: MSMg01no181_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:29 2005
(621 letters)
>mm_chr19_9069108_9070128
Length = 1021
Score = 1162 bits (601), Expect = 0.0
Identities = 613/617 (99%)
Strand = Plus / Plus
Query: 5 gaattccttctctctctcttctttttttcttggtgagaattttttttaattatctttaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttctctctctcttctttttttcttggtgagaattttttttaattatctttaat 264
Query: 65 ctttttttacaatccagttgttatcctcctccaggcccgtcctcgtcctctaacagttcc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttttttacaatccagttgttatcctcctccaggcccgtcctcgtcctctaacagttcc 324
Query: 125 tcatcccattcctcctctccagtcttcaagaggatgtcctccacccttccccactcccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcatcccattcctcctctccagtcttcaagaggatgtcctccacccttccccactcccca 384
Query: 185 ccctgtcaggcctccccactccctggggccttaagtctcttgagggttaggtgcatcttc 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 ccctgtcaggcctccccactccctggggccttaagtctcttgagggttaagtgcatcttc 444
Query: 245 tctgactgaggccagaggaggcagtcctctgctgtatatgtgtcagggacctggtactgg 304
||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctcactgaggccagaccaggcagtcctctgctgtatatgtgtcagggacctggtactgg 504
Query: 305 ctagtgaacgctgcttgattgttggctcagtgtctgagagatcttagaactccttcgctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctagtgaacgctgcttgattgttggctcagtgtctgagagatcttagaactccttcgctt 564
Query: 365 aactactgatggcaggtcagtgttcagctctctctttccctttggggagtgtttatgaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aactactgatggcaggtcagtgttcagctctctctttccctttggggagtgtttatgaca 624
Query: 425 gcatatctatcgtccttccgggtgtgtctctctgactatccaacccctcacctggttagg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcatatctatcgtccttccgggtgtgtctctctgactatccaacccctcacctggttagg 684
Query: 485 agtgtcagagctttccctctggtggagatctctaatcctagctatgagtcattatgttct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtgtcagagctttccctctggtggagatctctaatcctagctatgagtcattatgttct 744
Query: 545 tgggatggaaactccgtgtccctggcctcgtgtgtatggcaggttagttagagcatgtgg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgggatggaaactccgtgtccctggcctcgtgtgtatggcaggttagttagagcatgtgg 804
Query: 605 gtgcaggaggatggaag 621
|||||||||||||||||
Sbjct: 805 gtgcaggaggatggaag 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_o08.g1 MSMg01no181_o08.g1 CHROMAT_FILE:
MSMg01no181_o08.g1 PHD_FILE: MSMg01no181_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:29 2005
(287 letters)
>mm_chr19_9237468_9238155
Length = 688
Score = 441 bits (228), Expect = e-128
Identities = 274/290 (94%), Gaps = 5/290 (1%)
Strand = Plus / Minus
Query: 1 aaagacaatgaaacagctaaaaatgcaagaagaagatttcaaaagtttactaagaaatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 488 aaagacaatgaaacagctaaaaatgcaagaagaagatttcaaaagtttactaggaaatat 429
Query: 61 gatgactggccacatagatacaaaaaagatcaattccatccaaggcctggaaagggaaac 120
|||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
Sbjct: 428 gatgactggccacatagatacaaacaagatcaattccatccaaggcctgg-aagggaagc 370
Query: 121 cggggggtgggg--gggtgaaagaaacatcaacgtggatga-aaaagaacagaaactgcg 177
| ||||| |||| ||||||||||||||| | |||||||| |||| ||||||||||| |
Sbjct: 369 cagggggcgggggagggtgaaagaaacattgatgtggatgagaaaa-aacagaaactgag 311
Query: 178 tgagatttaaacaaaaacgttggaaatttaaaattcaatgactcaaaaattgcattagaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgagatttaaacaaaaacgttggaaatttaaaattcaatgactcaaaaattgcattagaa 251
Query: 238 agcatcattaatagacttgccccaccaaaagaatgaatatcaggtacaaa 287
|||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 250 agcatcgttaatagacttgtcccaccaaaagaatgaatatcaggtacaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
