Query= MSMg01no186_e10.b1 MSMg01no186_e10.b1 CHROMAT_FILE:
MSMg01no186_e10.b1 PHD_FILE: MSMg01no186_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:13 2005
(207 letters)
>mm_chr19_28390202_28390808
Length = 607
Score = 371 bits (192), Expect = e-107
Identities = 201/204 (98%), Gaps = 2/204 (0%)
Strand = Plus / Plus
Query: 5 gaattccagatctttagcaacg-tatctacattggctgaaaaagtgcagggatggtgata 63
|||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagatctttagcaa-gttatcttcattggctgaaaaagtgcagggatggtgata 263
Query: 64 gtttgttttaactattctatcgattcatttggtgagttagaataaatgttcatgtgccag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtttgttttaactattctatcgattcatttggtgagttagaataaatgttcatgtgccag 323
Query: 124 caatgtgcaaatccaatgctcctggtaaagaaagctatccatgtctcctcacttatgtct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caatgtgcaaatccaatgctcctggtaaagaaagctatccatgtctcctcacttatgtct 383
Query: 184 catacagaggttttcagtatgtgt 207
||||||||||||||||||||||||
Sbjct: 384 catacagaggttttcagtatgtgt 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no186_e10.g1 MSMg01no186_e10.g1 CHROMAT_FILE:
MSMg01no186_e10.g1 PHD_FILE: MSMg01no186_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:01:13 2005
(292 letters)
>mm_chr19_28543694_28544385
Length = 692
Score = 553 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Minus
Query: 1 tttgtttggggtcactgccacgtgaggaactgtattgaaggttcgcagcatctggaaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttgtttggggtcactgccacgtgaggaactgtattgaaggttcgcagcatctggaaggt 499
Query: 61 ggagaatttctggaagagaaggagagctttcggtgtgacagggagagatgatcaatggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ggagaatttctggaagagaaggagagctttcggtgtgacagggagagatgatcaatggat 439
Query: 121 gcatttgataagtgcccagacacatgcatctctatagtagttacttgcctaagctccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gcatttgataagtgcccagacacatgcatctctatagtagttacttgcctaagctccttc 379
Query: 181 ccttaccagcagtgtagagttcttcacctggaagaaataaatctctctagattgctagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccttaccagcagtgtagagttcttcacctggaagaaataaatctctctagattgctagaa 319
Query: 241 aactttccattcccttgtagtacacaggccttggctgcaggttttt 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 aactttccattcccttgtagtacacaggccttggctgcaggttttt 273
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
