Query= MSMg01no187_c06.b1 MSMg01no187_c06.b1 CHROMAT_FILE:
MSMg01no187_c06.b1 PHD_FILE: MSMg01no187_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:21 2005
(318 letters)
>mm_chr19_27138880_27139598
Length = 719
Score = 547 bits (283), Expect = e-160
Identities = 301/307 (98%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 10 cttgtgttggcaaaagtgtgagcgactgtggctgctgctttctgtgggcccccaccctgg 69
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cttgtcttagcaaaagtgtgagcgactgtggctgctgctttctgtgggcccccaccctgg 457
Query: 70 agccagtccagccttcgctgcagggctttctctttcagggtcctaataaaggaccagcat 129
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 456 agccagtccagccttcgctgcaggactttctctttcagggtcctaataaaggaccagcat 397
Query: 130 ggatggggattcttatctaccttctcacttcatggttcctgcactttctttactaaggtc 189
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 396 ggatgcggattcttatctaccttctcacttcatggttcctgcactttccttactaaggtc 337
Query: 190 ctcactacccaaaatagaatcaga-ttttttttttaatttgaaagccattgtgtgtgtaa 248
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 336 ctcactacccaaaatagaatcagacttttttttttaatttgaaagccattgtgtgtgtaa 277
Query: 249 tttgaaatttcatgggagagtaaacagggtgtatgtggctccctttaaattaccacaccc 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tttgaaatttcatgggagagtaaacagggtgtatgtggctccctttaaattaccacaccc 217
Query: 309 taaggtc 315
|||||||
Sbjct: 216 taaggtc 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_c06.g1 MSMg01no187_c06.g1 CHROMAT_FILE:
MSMg01no187_c06.g1 PHD_FILE: MSMg01no187_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:22 2005
(199 letters)
>mm_chr19_27047406_27048004
Length = 599
Score = 385 bits (199), Expect = e-111
Identities = 199/199 (100%)
Strand = Plus / Plus
Query: 1 tgtctcccaaatgatgtcctagaggctggaaggtcaggggatgggaagggaacacagttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtctcccaaatgatgtcctagaggctggaaggtcaggggatgggaagggaacacagttg 260
Query: 61 tcctaagcttctgtagacatgacaaaagacaaagagttatgcaggagccctgcaggcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctaagcttctgtagacatgacaaaagacaaagagttatgcaggagccctgcaggcacc 320
Query: 121 ctgaggcaagggtagttagtacacatgcctgctctctcttcacccctaggtggagcacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaggcaagggtagttagtacacatgcctgctctctcttcacccctaggtggagcacag 380
Query: 181 ttagtaaaatttgagagga 199
|||||||||||||||||||
Sbjct: 381 ttagtaaaatttgagagga 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 599
Length adjustment: 8
Effective length of query: 191
Effective length of database: 591
Effective search space: 112881
Effective search space used: 112881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
