Query= MSMg01no187_o16.b1 MSMg01no187_o16.b1 CHROMAT_FILE:
MSMg01no187_o16.b1 PHD_FILE: MSMg01no187_o16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:22 2005
(312 letters)
>mm_chr19_30764438_30765149
Length = 712
Score = 547 bits (283), Expect = e-160
Identities = 301/307 (98%)
Strand = Plus / Plus
Query: 6 aattcaaaagcaaatagttcttgcaaggctaaaatccaacttttgggccaaatgctccaa 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattcaaaagcaaatagctcttgcaaggctaaaatccaacttttgggccaaatgctccaa 265
Query: 66 aattttcttgcttcctaccatttactctgcaataaaatggaaaataattttgattgccag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aattttcttgcttcctaccatttactctgcaataaaatggaaaataattttgattgccag 325
Query: 126 actctgggactatcctctgatggctcaacctgcaagtggtcaaaaagttctaattctggt 185
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 326 actctgggactatcctctgatggctcaacctgcaagtggtcagaaagttctaattctggt 385
Query: 186 ctgaggccgcttgcaggattctttaatcagtgtggcattctcctttgggaacaggatatt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 386 ctgaggccgcttgcaggattctttaatcagtgtggcattctcctttgggaacaagatatt 445
Query: 246 gctcgcttgaattctttccacaggggaagaaacaattttctaggcccatttccctgagaa 305
||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 446 gcttgcttgaattctttccacaggagaagatacaattttctaggcccatttccctgagaa 505
Query: 306 ttgctta 312
|||||||
Sbjct: 506 ttgctta 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 712
Length adjustment: 9
Effective length of query: 303
Effective length of database: 703
Effective search space: 213009
Effective search space used: 213009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_o16.g1 MSMg01no187_o16.g1 CHROMAT_FILE:
MSMg01no187_o16.g1 PHD_FILE: MSMg01no187_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:22 2005
(288 letters)
>mm_chr19_30921185_30921871
Length = 687
Score = 511 bits (264), Expect = e-149
Identities = 282/288 (97%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 tctactactctctgaaatgagagaactgggaatcatgctgaactcagactctcctccata 60
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 380 tctactactctctgaaatgagagaactgggaatcatgctgaacccagagtctcctccata 321
Query: 61 ctggagatattccaggcttctgagtaatatcccaactcagaggtgtctgggggaaaaatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 320 ctggagatattccaggcttctgagtaatatcccaactcagaggtgtctgggg-aaaaatt 262
Query: 121 cagatcaaacaaaaagagcttagagcctttaagtaatgtgtagtgttagaatctacagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatcaaacaaaaagagcttagagcctttaagtaatgtgtagtgttagaatctacagta 202
Query: 181 agctgtggaagtagctcagtgatagaattcttgactagcctgcatgatgccctgggtttg 240
||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctgcg-aagtggctcagtgatagaattcttgactagcctgcatgatgccctgggtttg 143
Query: 241 tttagtcatgagcaacataaagcaaagaagatataagtttcatagact 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 tttagtcatgagcaacataaagcaaagaagatataagtttcatagact 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
