Query= MSMg01no190_p05.b1 MSMg01no190_p05.b1 CHROMAT_FILE:
MSMg01no190_p05.b1 PHD_FILE: MSMg01no190_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:23 2005
(650 letters)
>mm_chr19_27403962_27405009
Length = 1048
Score = 1141 bits (590), Expect = 0.0
Identities = 632/646 (97%), Gaps = 4/646 (0%)
Strand = Plus / Plus
Query: 5 gaattccagaaagtgttgaagttctaactacttcagaaacagtcataaatgaagcaacag 64
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 205 gaattccagaaagtgttgaagttctaactgcttcagaaccagtcataaatgaagcaacag 264
Query: 65 ctcaaagacactgtggtttgttatcttagggacccctgctttaggagtgggccccttttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcaaagacactgtggtttgttatcttagggacccctgctttaggagtgggccccttttg 324
Query: 125 tgtctctgaagcatggtcctctttttcaagatgactttctgtggaatgtgattgagtagc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtctctgaagcatggtcctctttttcaagatgactttctgtggaatgtgattgagtagt 384
Query: 185 aaaggaacggagagcatcagataagcgggagatgcatagggcatctttactgtctgcctt 244
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 385 aaaggaacggagagcatcagacaagcgggagatgcatagggcatctttactgtctgcc-t 443
Query: 245 tttttgtaggtagattgatagacc-cctgactttcattcatagatttgccttagctcagg 303
|||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct: 444 tttttgtaggtagattgatagacctcc-gacttttattcatagatttgccttagctcagg 502
Query: 304 ccaatctcttccttcactgtaccatctccagtcatggtataaatgtggcacacagtaatg 363
|||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 503 ccaacctcctcctt-actgtaccatctcaagtcatggtataaatgtggcacacagtaatg 561
Query: 364 tccaaatgggagttactgtttagtgttgatctcattcttcataatgctttgaggaattgc 423
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tccaaatgggagttaatgtttagtgttgatctcattcttcataatgctttgaggaattgc 621
Query: 424 cccagaatggttgcattcagtatttctgaggaaggcaactgacaaccaaattaattatca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cccagaatggttgcattcagtatttctgaggaaggcaactgacaaccaaattaattatca 681
Query: 484 ggatgtgtgcaggcactcatacccatctgagttgtttctttagattataatcctcaagag 543
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ggatgtgtgcaggcactcttacccatctgagttgtttctttagattataatcctcaagag 741
Query: 544 gaatatttgttgcaacagcagcatggataagtaacctttgaaggacaatatcaactcttg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaatatttgttgcaacagcagcatggataagtaacctttgaaggacaatatcaactcttg 801
Query: 604 agtagcgttttaggaagaaaaacagtgaggcttttactgcctctac 649
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 agtagcgttttaggaagaaaaacagtgaggcttttactgcctctac 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1048
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1038
Effective search space: 664320
Effective search space used: 664320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_p05.g1 MSMg01no190_p05.g1 CHROMAT_FILE:
MSMg01no190_p05.g1 PHD_FILE: MSMg01no190_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:23 2005
(292 letters)
>mm_chr19_27445244_27445938
Length = 695
Score = 530 bits (274), Expect = e-155
Identities = 288/294 (97%), Gaps = 3/294 (1%)
Strand = Plus / Minus
Query: 1 tttcctctggaaaaacaaaaaccaagaaccttttacctggcagcagtatgaaaag---ag 57
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 494 tttcctctgggaaaacacaaaccaagaaccttttacctggcagcagtatgaaaagagaag 435
Query: 58 gacagagtaggattcagaaaattccatgctaaaaatggccagaaactcagctaacagtag 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gacagagtaggattcagaaaattccatgctaaaaatggccagaaactcagctaacagtag 375
Query: 118 gtaggaccctacttcatcatcaaatgataaagggcattgctttctgccatcactgactac 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtaggaccctacttcatcatcaaatgataaagggcattgctttctgccatcactgactac 315
Query: 178 ttgaaatgcgcattccttttagggtagcaacactgcataagcttgttgtggctgactggc 237
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 314 ttgaaatgcgcattccttttagggtagcaacactgcatgagcttgttgtggctgactggc 255
Query: 238 taggaattgtaaggtcaggatgacctgggaagccttgaattttgtttatggtta 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 taggaattgtaaggtcaggatgacctgggaagccttgaattttgtttatggtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 695
Length adjustment: 9
Effective length of query: 283
Effective length of database: 686
Effective search space: 194138
Effective search space used: 194138
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
