Query= MSMg01no192_d06.b1 MSMg01no192_d06.b1 CHROMAT_FILE:
MSMg01no192_d06.b1 PHD_FILE: MSMg01no192_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:15 2005
(411 letters)
>mm_chr19_6037210_6038020
Length = 811
Score = 665 bits (344), Expect = 0.0
Identities = 380/408 (93%), Gaps = 26/408 (6%)
Strand = Plus / Plus
Query: 4 ggaattctagcaatccttgaagatattctccttatcctccaggaagctactagcctctgg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagcaatccttgaagatattctccttatcctccaggaagctactagcctctgg 263
Query: 64 ctcctgattgttccagactcaccactctagagctgccagactctaggcaattaattatat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcctgattgttccagactcaccactctagagctgccagactctaggcaattaattatat 323
Query: 124 tacccacttgctacctaactacacacacacacacacacacacacacacacacacacacac 183
|||||||| ||||||||||| ||||||||||||||||||
Sbjct: 324 tacccactcgctacctaact----------------------acacacacacacacacac 361
Query: 184 acacacacaccatctgcccatacacaaacacacacacaatctgcccatgcatacacacac 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 362 acacacacaccatctgcccatacacaaacacacacacaatctgcccatgcat----acac 417
Query: 244 acacacacacacacacacacacacacacacacacacacagccatccatttcccatcattc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acacacacacacacacacacacacacacacacacacacagccatccatttcccatcattc 477
Query: 304 gtttcttcgttccttccatgctggttgagctcttagcagtcctcagatgagggtctggtc 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 478 gtttcttcgttccttccatgctggttgagctcttagcagtcctcagatgagggtctgggc 537
Query: 364 caagggagacagatcaaatggttgttgtgaaacaaactattttaagca 411
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 caagggagacagatcaaatggttgttgtgaaacaaactattttaagca 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 190
Number of extensions: 57
Number of successful extensions: 57
Number of sequences better than 10.0: 1
Number of HSP's gapped: 50
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_d06.g1 MSMg01no192_d06.g1 CHROMAT_FILE:
MSMg01no192_d06.g1 PHD_FILE: MSMg01no192_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:15 2005
(380 letters)
>mm_chr19_6076023_6076802
Length = 780
Score = 704 bits (364), Expect = 0.0
Identities = 376/380 (98%)
Strand = Plus / Minus
Query: 1 ctgataagggtgggattggagttgtcttgcactgaaatccaactaacgtaaagcagggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ctgataagggtgggattggagttgtcttgcactgaaatccaactaacgtaaagcagggta 521
Query: 61 gcaggacgtgagtgagcactaacgctgactgttcctacctgcttctctagctgcgtagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gcaggacgtgagtgagcactaacgctgactgttcctacctgcttctctagctgcgtagag 461
Query: 121 aatgtcctctggcccagctgatggacagtgagacggacatggtacggcagattcgggctc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 460 aatgtcctctggcccagctgatggacagtgagacggacatggtacggcagatccgggctc 401
Query: 181 tagacagcgacatgcagaccctggtctatgagaactacaacaagttcatctcagctacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tagacagcgacatgcagaccctggtctatgagaactacaacaagttcatctcagctacag 341
Query: 241 gtgaccccactgggacacactcctcagtcttacaccacccccaccaggtcctcaccccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtgaccccactgggacacactcctcagtcttacaccacccccaccaggtcctcaccccgt 281
Query: 301 gctaagaaaaacagggattaaaggaaatagacccagattacaattgggtcccaaccttaa 360
| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 280 gttaagaaaaacagggattaaaggaaagagacccagattacaattgggtcccaaccttaa 221
Query: 361 tccactgctgttgaagtgat 380
|||||||||| |||||||||
Sbjct: 220 tccactgctgctgaagtgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
