Query= MSMg01no206_a17.b1 MSMg01no206_a17.b1 CHROMAT_FILE:
MSMg01no206_a17.b1 PHD_FILE: MSMg01no206_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:05 2005
(371 letters)
>mm_chr19_10250840_10251609
Length = 770
Score = 688 bits (356), Expect = 0.0
Identities = 362/364 (99%), Gaps = 1/364 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgagagcctttgctggtttatcgaattatcatttattgaattgggtggtggt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaattctctgagagcctttgctggtttatcgaattatcatttattgaattgggtggtggt 508
Query: 65 tgacaggttagcaatttactcagtataacattaaaaatattccacagtttttgcaatctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgacaggttagcaatttactcagtataacattaaaaatattccacagtttttgcaatctt 448
Query: 125 gattgtcttcatttttattttttttttaaactaaattgagatcttgatcttcaggcagtc 184
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gattgtcttcattttta-attttttttaaactaaattgagatcttgatcttcaggcagtc 389
Query: 185 caagtgaagagcctttgtcctctagccccaggagattttgcaacagaagctaaagctctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 caagtgaagagcctttgtcctctagccccaggagattttgcaacagaagctaaagctctg 329
Query: 245 atctctgggtcttagggagagggatgggaacacagcctacaggcagtgagtgtgtcggag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 atctctgggtcttagggagagggatgggaacacagcctacaggcagtgagtgtgtcggag 269
Query: 305 aggatgctgtcctgacatctcctgtggaggtgttgaattctcttccttaccatttattct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aggatgctgtcctgacatctcctgtggaggtgttgaattctcttccttaccatttattct 209
Query: 365 tctg 368
||||
Sbjct: 208 tctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 770
Length adjustment: 9
Effective length of query: 362
Effective length of database: 761
Effective search space: 275482
Effective search space used: 275482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_a17.g1 MSMg01no206_a17.g1 CHROMAT_FILE:
MSMg01no206_a17.g1 PHD_FILE: MSMg01no206_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:05 2005
(227 letters)
>mm_chr19_10214452_10215078
Length = 627
Score = 431 bits (223), Expect = e-125
Identities = 226/227 (99%)
Strand = Plus / Plus
Query: 1 catggattttactcaggacaagtcagaaaagcagacagacagacaatcaggcagggggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catggattttactcaggacaagtcagaaaagcagacagacagacaatcaggcagggggct 260
Query: 61 acttacagatagatcttggttcttggtttagagtgtcatcccaagactttcagaggacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttacagatagatcttggttcttggtttagagtgtcatcccaagactttcagaggacat 320
Query: 121 gatgccttggtgaaggtggaaggggaggtaactcacgtagctttgagataaagggattta 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gatgccttggtgaaggtggaaggggaggtaactcacgtagttttgagataaagggattta 380
Query: 181 agttagctgtgaggttctcatctgggtgccacctctcactccactgg 227
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttagctgtgaggttctcatctgggtgccacctctcactccactgg 427
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space: 134724
Effective search space used: 134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
