TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCATCTAGATGTACATTCAGTAATCTTCACACTTTTAACTTTAAATTTTT
TTATTTATTAATTTCTTTTTCCACATTTCAAATGCTATCCCGAAAGTTCC
CTATATCCTCCCCCCACCCTGCTCCCCTACCCACCAACTCCCACTTCTTG
GCCCTGGTGTTCCCCTGTACACTTTTAACTTTTAAGATACAATGAATTAA
CATTGAGATTATCATGGCTTCCAGCCTGACCAGGACTTGAGATATTTTAT
ATAATCAATAAAATGTTTCTTCAATATCAACTAAAAGTGGGGACTCAAAT
GGATATTTTATACTAATGTTCATCACAAAATTTTACATTAGCCAAAATGT
AGAAACATCTCAAGCGCCCACCAGCTTCTAAATAGATAATCAATATTGGG
TCTATACACACAGATATATACAGATATGTACAGAGGTTTTTCAGCTTCAA
AAAGAAACAGATTTGTACACGTGCTAGCATATGAATCAACTTTAAAGACA
TTATGTTAACTGGAACAAACCAAACAATAAAAGGCAGCTACTGTATGTTT
GCACTCTGTATGATTCTTAAAAGAATAGAAATTCATAGAAATAACGTCAG
ATTGATGACTATGAGGAGCTTGGAGGAAGGGGAAAAAGGGCTGTTGTTTA
ATGGCATAAGCTTCAGTTGATAGN

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTATTTTCACTACCCTTGGCATGGCAGAGAA
GAAGTCTGACACTTCGTTCCCCAGTACTCTTTTCATTATATGATCCTGGG
ATATGATGAAGGATCAAAGCAAAATGAAAGATTTGAAAGTAAAAATGGCA
AAGGCATTGCTTCCCATAGGTTCCTGAGTATCTTCTGAGGTCTCCCCTGG
AGTGTGGCCGTCATCTGAAATCAACAGAGGTGACTTCTGCTGACAGGTGT
TGATGTCACTAATAACATATCCCCTGTGATCATTAAACTTCCTAATTTTC
CCCAATTNNGTTTTTTTTCGCCCCCCTACCCATTCTAATTACTTCAAGTC
TCTGTCTCTCTGTACCCAACCACAACATATCACAAAGACAGGCAATGATG
CAGTCCCTTATCTGGATACAGAAACTATTCAAGAGTGACAGAAGACTCCT
AAACAACCTGAGTAGACAGAGTGAAGTTCAAGTCCAGTGCACTTCATTCA
TAAGATGATTTCTTGAGTTCCCAGACTCTTGGTCATCTATATTGACCAGG
AACAAATAGAAGCAGTGAATTAAAAAGGATGCAATCTCTAGCAGTAATTT
GGACAGTAGTGATACCTGACAACACCAGCCATTGCTGTCCTAACCCCTTT
ATTTAATAGTAACTACAAGA

Query= MSMg01no213_d11.b1 MSMg01no213_d11.b1 CHROMAT_FILE:
MSMg01no213_d11.b1 PHD_FILE: MSMg01no213_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:11 2005
         (637 letters)



>mm_chr19_26328490_26329526
          Length = 1037

 Score = 1162 bits (601), Expect = 0.0
 Identities = 628/637 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtaatcttcacacttttaactttaaatttttttatttattaatttctttttccacatttc 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 201 gtaatcttcacacttttaactttaaatttttttatttattaatttctttttatacatttc 260

                                                                       
Query: 61  aaatgctatcccgaaagttccctatatcctccccccaccctgctcccctacccaccaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgctatcccgaaagttccctatatcctccccccaccctgctcccctacccaccaact 320

                                                                       
Query: 121 cccacttcttggccctggtgttcccctgtacacttttaacttttaagatacaatgaatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccacttcttggccctggtgttcccctgtacacttttaacttttaagatacaatgaatta 380

                                                                       
Query: 181 acattgagattatcatggcttccagcctgaccaggacttgagatattttatataatcaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acattgagattatcatggcttccagcctgaccaggacttgagatattttatataatcaat 440

                                                                       
Query: 241 aaaatgtttcttcaatatcaactaaaagtggggactcaaatggatattttatactaatgt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatgtttcttcaatatcaactaaaagtggggactcaaatggatattttatactaatgt 500

                                                                       
Query: 301 tcatcacaaaattttacattagccaaaatgtagaaacatctcaagcgcccaccagcttct 360
           ||||||||||||||||||||||||||||||||||||||||||||| | | |  |||||||
Sbjct: 501 tcatcacaaaattttacattagccaaaatgtagaaacatctcaagtggctattagcttct 560

                                                                       
Query: 361 aaatagataatcaatattgggtctatacacacagatatatacagatatgtacagaggttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatagataatcaatattgggtctatacacacagatatatacagatatgtacagaggttt 620

                                                                       
Query: 421 ttcagcttcaaaaagaaacagatttgtacacgtgctagcatatgaatcaactttaaagac 480
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 621 ttcagcttcaaaaagaaacagatttggacacgtgctagcatatgaatcaactttaaagac 680

                                                                       
Query: 481 attatgttaactggaacaaaccaaacaataaaaggcagctactgtatgtttgcactctgt 540
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attatcttaactggaacaaaccaaacaataaaaggcagctactgtatgtttgcactctgt 740

                                                                       
Query: 541 atgattcttaaaagaatagaaattcatagaaataacgtcagattgatgactatgaggagc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atgattcttaaaagaatagaaattcatagaaataacgtcagattgatgactatgaggagc 800

                                                
Query: 601 ttggaggaaggggaaaaagggctgttgtttaatggca 637
           |||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttggaggaaggggaaaaagggctgttgtttaatggca 837


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space:   643929
Effective search space used:   643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no213_d11.g1 MSMg01no213_d11.g1 CHROMAT_FILE:
MSMg01no213_d11.g1 PHD_FILE: MSMg01no213_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:11 2005
         (234 letters)



>mm_chr19_26432544_26433177
          Length = 634

 Score =  453 bits (234), Expect = e-132
 Identities = 234/234 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtactcttttcattatatgatcctgggatatgatgaaggatcaaagcaaaatgaaaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cagtactcttttcattatatgatcctgggatatgatgaaggatcaaagcaaaatgaaaga 375

                                                                       
Query: 61  tttgaaagtaaaaatggcaaaggcattgcttcccataggttcctgagtatcttctgaggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tttgaaagtaaaaatggcaaaggcattgcttcccataggttcctgagtatcttctgaggt 315

                                                                       
Query: 121 ctcccctggagtgtggccgtcatctgaaatcaacagaggtgacttctgctgacaggtgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctcccctggagtgtggccgtcatctgaaatcaacagaggtgacttctgctgacaggtgtt 255

                                                                 
Query: 181 gatgtcactaataacatatcccctgtgatcattaaacttcctaattttccccaa 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gatgtcactaataacatatcccctgtgatcattaaacttcctaattttccccaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space:   140625
Effective search space used:   140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)