Query= MSMg01no214_h20.b1 MSMg01no214_h20.b1 CHROMAT_FILE:
MSMg01no214_h20.b1 PHD_FILE: MSMg01no214_h20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:49 2005
(703 letters)
>mm_chr19_28172478_28173580
Length = 1103
Score = 652 bits (337), Expect = 0.0
Identities = 340/341 (99%)
Strand = Plus / Minus
Query: 363 acaactcagaggttttgacttgttctctgattatcatttactttgtttggtttggtttgg 422
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1103 acaactcagaggttttgacttgttctccgattatcatttactttgtttggtttggtttgg 1044
Query: 423 tttggtttgcaagatagggtttttctgtgtagctctggctgtcctgtagcttgctttgta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 tttggtttgcaagatagggtttttctgtgtagctctggctgtcctgtagcttgctttgta 984
Query: 483 gaccaggctggccttgaactcataaagatatacctgcctctgcctcccaagtgctgagat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 983 gaccaggctggccttgaactcataaagatatacctgcctctgcctcccaagtgctgagat 924
Query: 543 caaagtcgccaccacctggcctgtttttgtttgtttgttttgctttctcttatgaattgt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 923 caaagtcgccaccacctggcctgtttttgtttgtttgttttgctttctcttatgaattgt 864
Query: 603 ttggtagtgtatctctcaatttctaaaagtctgggaaattttatgttttctattaacata 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 ttggtagtgtatctctcaatttctaaaagtctgggaaattttatgttttctattaacata 804
Query: 663 tgatacatcatattattggactagggcaccattctgctgag 703
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 tgatacatcatattattggactagggcaccattctgctgag 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1103
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1093
Effective search space: 757449
Effective search space used: 757449
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no214_h20.g1 MSMg01no214_h20.g1 CHROMAT_FILE:
MSMg01no214_h20.g1 PHD_FILE: MSMg01no214_h20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:49 2005
(190 letters)
>mm_chr19_28165321_28165909
Length = 589
Score = 304 bits (157), Expect = 3e-87
Identities = 181/189 (95%), Gaps = 3/189 (1%)
Strand = Plus / Plus
Query: 1 acacaatgaactacaaaccataggggtcccaagagaatcctttgtggttcatgaggcatc 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 201 acacaatgaactacaaaccataggggtcccaagagaatcctttgtggct-atgaggcatc 259
Query: 61 ccgctgaaatagaggctacggtctccccatgggctcaccttgttgcctaagtgatagggg 120
||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 260 ccgctgaaatagaggctac-gtctccccataggctcaccttgttgcctaagtgatagggg 318
Query: 121 tggaggcaaggaaaactgagaaaggggagctgaaaactaaggcgcggagtgggggtgggg 180
|||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||
Sbjct: 319 tggaggcaaggaaaactgagaaaggggagctgaaaactaaggtgcggagtcggagtgggg 378
Query: 181 gg-tggggg 188
|| ||||||
Sbjct: 379 gggtggggg 387
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 589
Length adjustment: 8
Effective length of query: 182
Effective length of database: 581
Effective search space: 105742
Effective search space used: 105742
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
