Query= MSMg01no215_p09.b1 MSMg01no215_p09.b1 CHROMAT_FILE:
MSMg01no215_p09.b1 PHD_FILE: MSMg01no215_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:45 2005
(133 letters)
>mm_chr19_10240003_10240534
Length = 532
Score = 165 bits (85), Expect = 1e-45
Identities = 98/103 (95%), Gaps = 5/103 (4%)
Strand = Plus / Minus
Query: 33 cctcccca-g-atatgctcacccacacacatttaaacacacataggtgcatacatggcac 90
|||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 332 cctccccatgcatatgctcacccacacacatttaa--acacataggtgcatacatggcac 275
Query: 91 atacaaatgcaataaaaaggtgaactaagatgtaccactcagt 133
|||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 274 atacaaatgcaa-aaaaaggtgaactaagatgtaccactcagt 233
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 133
Length of database: 532
Length adjustment: 8
Effective length of query: 125
Effective length of database: 524
Effective search space: 65500
Effective search space used: 65500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no215_p09.g1 MSMg01no215_p09.g1 CHROMAT_FILE:
MSMg01no215_p09.g1 PHD_FILE: MSMg01no215_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:45 2005
(188 letters)
>mm_chr19_10154435_10155022
Length = 588
Score = 344 bits (178), Expect = 2e-99
Identities = 184/186 (98%)
Strand = Plus / Plus
Query: 1 actcagggctgtgtggtgagaaccaacagctttactacagacattaaggaagtctttgtc 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 actcagggctgtgtggtgagaaccaacagctttactacaggcattaaggaagtctttgtc 260
Query: 61 ctcgctatcaaaagacttctaagtaatcaatgctactatccaaacacttctaaccaaagc 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgctatcaaaagacttctaagtaatcaatgctactatccaaacacttctaaccaaagc 320
Query: 121 taacaagccatttcccagaagagaaacagagacaggtgttgggcagaaaataaaatccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taacaagccatttcccagaagagaaacagagacaggtgttgggcagaaaataaaatccct 380
Query: 181 gcctag 186
||||||
Sbjct: 381 gcctag 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
