Query= MSMg01no216_l23.b1 MSMg01no216_l23.b1 CHROMAT_FILE:
MSMg01no216_l23.b1 PHD_FILE: MSMg01no216_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:52 2005
(317 letters)
>mm_chr19_23238085_23238800
Length = 716
Score = 551 bits (285), Expect = e-161
Identities = 303/309 (98%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 10 ctcagcaatttcccgttgcttagctcgccagggctgccaggaggaaccacagacattctc 69
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 210 ctcagcaatttcccgttgcttagctcgccagggctgccagaaggaaccacagacattctc 269
Query: 70 ttgactgagtggacagtagtttccggaagtctggaaactcattaaggtctctcaggatag 129
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 270 -tgactgagtggacagtagtttctggaagtctggaaactcattaaggtctctcaggatag 328
Query: 130 ctgctcactgtgctcttacgcccctgccttgttcccctgttacaaggacaccggtcatgg 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgctcactgtgctcttacgcccctgccttgttcccctgttacaaggacaccggtcatgg 388
Query: 190 gatgaagatccacccccc-agggacctcatttaattcccattacctccttaaggactcaa 248
|||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 389 gatgaagacccacccccccagggacctcatttaagtcccattacctccttaaggactcaa 448
Query: 249 tttagggaccaagcccctttctactccaggattctcaggtgcaaagtcctaaccaaaaat 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tttagggaccaagcccctttctactccaggattctcaggtgcaaagtcctaaccaaaaat 508
Query: 309 gtaaatgtg 317
|||||||||
Sbjct: 509 gtaaatgtg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 716
Length adjustment: 9
Effective length of query: 308
Effective length of database: 707
Effective search space: 217756
Effective search space used: 217756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no216_l23.g1 MSMg01no216_l23.g1 CHROMAT_FILE:
MSMg01no216_l23.g1 PHD_FILE: MSMg01no216_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:43:52 2005
(250 letters)
>mm_chr19_23345030_23345679
Length = 650
Score = 358 bits (185), Expect = e-103
Identities = 197/201 (98%)
Strand = Plus / Minus
Query: 1 agatggactagagataggacagggggttgctgtgagcaaattaagtcagataggttgaga 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 401 agatggactagagataggacaggaggttgctgtgagcaaattaagtcagataggttgaga 342
Query: 61 atagagggagagttataagctaaaggaagtacagattagtcaggaaactagaagaaatat 120
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 341 gtagagggagagttataagctaaaggaagcacagattagtcaggaaactagaagaaatat 282
Query: 121 ataatagaatttagagttctgagtagagatagaaaaaggagataggaaaaagttgaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ataatagaatttagagttctgagtagagatagaaaaaggagataggaaaaagttgaaact 222
Query: 181 aaggctgagttacaaagcctt 201
| |||||||||||||||||||
Sbjct: 221 agggctgagttacaaagcctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
