MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-235I16
Chromosome	19 (Build37)
Map Location	29,823,097 - 29,823,406
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG627788, Slc1a1, LOC545262, 4430402I18Rik, Ppapdc2, LOC100042006, EG226086, Cdc37l1, LOC672214, Ak3, Rcl1, LOC433238, Jak2, Insl6, Rln1, 5033414D02Rik, Cd274, Pdcd1lg2, C030046E11Rik, D19Wsu12e, Mlana, 9930021J03Rik
Downstream gene	Ranbp6, Il33, Trpd52l3, Uhrf2, Gldc, EG625917, Mbl2, LOC100042088, LOC668020, EG546723, Dkk1, Prkg1
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG627788 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627788 MGI:3646480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 343 ESTs, 10 Proteins

name	Slc1a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20510 MGI:105083
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545262 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 2177 ESTs, 10 Proteins pseudo : _no_value

name	4430402I18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381218 MGI:1918036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppapdc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74411 MGI:1921661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042006 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	EG226086 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226086 MGI:3643046
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	Cdc37l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67072 MGI:1914322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672214 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 1115 ESTs, 10 Proteins

name	Ak3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56248 MGI:1860835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rcl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:59028 MGI:1913275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433238 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433238
definition	note : high mobility group protein 1-like pseudo : _no_value

name	Jak2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16452 MGI:96629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Insl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27356 MGI:1351595
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19773 MGI:97931
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5033414D02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67759 MGI:1915009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd274 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60533 MGI:1926446
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdcd1lg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58205 MGI:1930125
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C030046E11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226089 MGI:1924893
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D19Wsu12e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226090 MGI:106250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mlana (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77836 MGI:108454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9930021J03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240613 MGI:2444398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ranbp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240614 MGI:2683212
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il33 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77125 MGI:1924375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trpd52l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66745 MGI:1913995
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uhrf2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109113 MGI:1923718
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gldc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104174 MGI:1341155
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG625917 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625917 MGI:3644512
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 459 ESTs, 7 Proteins

name	Mbl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17195 MGI:96924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042088 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC668020 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668020
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	EG546723 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546723 MGI:3645534
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Dkk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13380 MGI:1329040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19091 MGI:108174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG627788 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270481 GeneID:627788 MGI:3646480
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 343 ESTs, 10 Proteins product : predicted gene, EG627788 transcript_id : XM_892488.3

name	Slc1a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130482 GeneID:20510 MGI:105083
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 transcript_id : NM_009199.2

name	4430402I18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119372320 GeneID:381218 MGI:1918036
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4430402I18 gene transcript_id : NM_198651.2

name	Ppapdc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361366 GeneID:74411 MGI:1921661
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidic acid phosphatase type 2 domain containing 2 transcript_id : NM_028922.2

name	EG226086 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270418 GeneID:226086 MGI:3643046
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : predicted gene, EG226086 transcript_id : XM_140592.5

name	Cdc37l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802417 GeneID:67072 MGI:1914322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell division cycle 37 homolog (S. cerevisiae)-like 1 transcript_id : NM_025950.2

name	LOC672214 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270483 GeneID:672214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 1113 ESTs, 10 Proteins product : similar to ribosomal protein L26, transcript variant 1 transcript_id : XM_001478773.1

name	LOC672214 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270485 GeneID:672214
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 67 ESTs, 1 Protein product : similar to ribosomal protein L26, transcript variant 2 transcript_id : XM_001478782.1

name	Ak3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956103 GeneID:56248 MGI:1860835
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate kinase 3 transcript_id : NM_021299.1

name	Rcl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581584 GeneID:59028 MGI:1913275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA terminal phosphate cyclase-like 1 transcript_id : NM_021525.2

name	Jak2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326479 GeneID:16452 MGI:96629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Janus kinase 2 transcript_id : NM_008413.2

name	Jak2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326477 GeneID:16452 MGI:96629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Janus kinase 2 transcript_id : NM_001048177.1

name	Insl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305184 GeneID:27356 MGI:1351595
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like 6 transcript_id : NM_013754.1

name	Rln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51093875 GeneID:19773 MGI:97931
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : relaxin 1 transcript_id : NM_011272.1

name	5033414D02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802232 GeneID:67759 MGI:1915009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5033414D02 gene transcript_id : NM_026362.2

name	Cd274 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45433566 GeneID:60533 MGI:1926446
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD274 antigen transcript_id : NM_021893.2

name	Pdcd1lg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946739 GeneID:58205 MGI:1930125
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death 1 ligand 2 transcript_id : NM_021396.1

name	C030046E11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486766 GeneID:226089 MGI:1924893
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C030046E11 gene transcript_id : NM_001081319.1

name	D19Wsu12e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487056 GeneID:226090 MGI:106250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 19, Wayne State University 12, expressed transcript_id : NM_001081213.1

name	Mlana (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625784 GeneID:77836 MGI:108454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melan-A transcript_id : NM_029993.1

name	9930021J03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377223 GeneID:240613 MGI:2444398
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9930021J03 gene transcript_id : NM_172836.2

name	Ranbp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53850663 GeneID:240614 MGI:2683212
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAN binding protein 6 transcript_id : NM_177721.3

name	Il33 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19526999 GeneID:77125 MGI:1924375
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 33 transcript_id : NM_133775.1

name	Trpd52l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385201 GeneID:66745 MGI:1913995
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tumor protein D52-like 3 transcript_id : NM_025741.1

name	Uhrf2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430765 GeneID:109113 MGI:1923718
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs product : ubiquitin-like, containing PHD and RING finger domains 2 transcript_id : NM_144873.2

name	Gldc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20070407 GeneID:104174 MGI:1341155
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycine decarboxylase transcript_id : NM_138595.1

name	EG625917 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270492 GeneID:625917 MGI:3644512
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 459 ESTs, 7 Proteins product : predicted gene, EG625917 transcript_id : XM_893121.3

name	Mbl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754655 GeneID:17195 MGI:96924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mannose binding lectin (C) transcript_id : NM_010776.1

name	LOC100042088 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270422 GeneID:100042088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001477550.1

name	Dkk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129892 GeneID:13380 MGI:1329040
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dickkopf homolog 1 (Xenopus laevis) transcript_id : NM_010051.3

name	Prkg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62177130 GeneID:19091 MGI:108174
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, cGMP-dependent, type I transcript_id : NM_001013833.1

name	Prkg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893043 GeneID:19091 MGI:108174
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, cGMP-dependent, type I transcript_id : NM_011160.2

name	EG627788 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998589 GeneID:627788 MGI:3646480
definition	codon_start : 1 product : similar to cytoplasmic dynein light chain 1 protein_id : XP_897581.1

name	Slc1a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678001 CCDS:CCDS29727.1 GeneID:20510 MGI:105083
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0015501 - glutamate:sodium symporter activity [Evidence IDA]; GO:0017153 - sodium:dicarboxylate symporter activity [Evidence IEA]; GO:0015293 - symporter activity [Evidence IEA] GO_process : GO:0006835 - dicarboxylic acid transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : solute carrier family 1, member 1; glutamate transporter mEAAC2; excitatory amino acid carrier 2 product : solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 protein_id : NP_033225.1

name	4430402I18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119372321 GeneID:381218 MGI:1918036
definition	codon_start : 1 product : hypothetical protein LOC381218 protein_id : NP_941053.2

name	Ppapdc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77861908 CCDS:CCDS29728.1 GeneID:74411 MGI:1921661
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA] codon_start : 1 product : phosphatidic acid phosphatase type 2 domain containing 2 protein_id : NP_083198.1

name	EG226086 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270419 GeneID:226086 MGI:3643046
definition	codon_start : 1 product : similar to Tekt5 protein protein_id : XP_140592.5

name	Cdc37l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385440 CCDS:CCDS29729.1 GeneID:67072 MGI:1914322
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IDA] GO_process : GO:0051301 - cell division [Evidence IEA] codon_start : 1 note : Hsp90-associating relative of Cdc37 product : cell division cycle 37 homolog (S. cerevisiae)-like 1 protein_id : NP_080226.1

name	LOC672214 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270486 GeneID:672214
definition	codon_start : 1 product : similar to ribosomal protein L26 isoform 2 protein_id : XP_001478832.1

name	LOC672214 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270484 GeneID:672214
definition	codon_start : 1 product : similar to ribosomal protein L26 isoform 1 protein_id : XP_001478823.1

name	Ak3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956104 CCDS:CCDS29730.1 GeneID:56248 MGI:1860835
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004017 - adenylate kinase activity [Evidence IEA] [Evidence TAS]; GO:0005525 - GTP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0046899 - nucleoside triphosphate adenylate kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0019201 - nucleotide kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolism [Evidence IEA] codon_start : 1 note : adenylate kinase 3 alpha-like 1 product : adenylate kinase 3 protein_id : NP_067274.1

name	Rcl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946950 CCDS:CCDS29731.1 GeneID:59028 MGI:1913275
definition	GO_component : GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006365 - 35S primary transcript processing [Evidence ISS]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : RNA 3'-terminal phosphate cyclase-like protein product : RNA cyclase homolog protein_id : NP_067500.1

name	Jak2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326478 GeneID:16452 MGI:96629
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004718 - Janus kinase activity [Evidence IMP] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA] [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence TAS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007259 - JAK-STAT cascade [Evidence IMP] [Evidence IDA]; GO:0030099 - myeloid cell differentiation [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007262 - STAT protein nuclear translocation [Evidence IDA]; GO:0007260 - tyrosine phosphorylation of STAT protein [Evidence IMP] codon_start : 1 product : Janus kinase 2 protein_id : NP_001041642.1

name	Jak2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326480 GeneID:16452 MGI:96629
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004718 - Janus kinase activity [Evidence IMP] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA] [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0019221 - cytokine and chemokine mediated signaling pathway [Evidence TAS]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007259 - JAK-STAT cascade [Evidence IMP] [Evidence IDA]; GO:0030099 - myeloid cell differentiation [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007262 - STAT protein nuclear translocation [Evidence IDA]; GO:0007260 - tyrosine phosphorylation of STAT protein [Evidence IMP] codon_start : 1 product : Janus kinase 2 protein_id : NP_032439.2

name	Insl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305185 CCDS:CCDS29732.1 GeneID:27356 MGI:1351595
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] GO_process : GO:0007582 - physiological process [Evidence IEA] codon_start : 1 note : relaxin/insulin-like factor 1 product : insulin-like 6 protein_id : NP_038782.1

name	Rln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51093876 CCDS:CCDS29733.1 GeneID:19773 MGI:97931
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005179 - hormone activity [Evidence IEA] GO_process : GO:0007582 - physiological process [Evidence IEA] codon_start : 1 exception : mismatches in translation product : relaxin 1 protein_id : NP_035402.1

name	5033414D02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312800 CCDS:CCDS29734.1 GeneID:67759 MGI:1915009
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC67759 protein_id : NP_080638.1

name	Cd274 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11230798 CCDS:CCDS29735.1 GeneID:60533 MGI:1926446
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005102 - receptor binding [Evidence IPI] codon_start : 1 note : programmed cell death 1 ligand 1; CD 274 antigen product : CD274 antigen protein_id : NP_068693.1

name	Pdcd1lg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946740 CCDS:CCDS29736.1 GeneID:58205 MGI:1930125
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0042130 - negative regulation of T cell proliferation [Evidence IDA]; GO:0042102 - positive regulation of T cell proliferation [Evidence IDA] codon_start : 1 note : butyrophilin-like protein product : programmed cell death 1 ligand 2 protein_id : NP_067371.1

name	C030046E11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486767 GeneID:226089 MGI:1924893
definition	codon_start : 1 product : hypothetical protein LOC226089 protein_id : NP_001074788.1

name	D19Wsu12e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487057 GeneID:226090 MGI:106250
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : putative aminopeptidase Fxna product : hypothetical protein LOC226090 protein_id : NP_001074682.1

name	Mlana (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625785 CCDS:CCDS29739.1 GeneID:77836 MGI:108454
definition	codon_start : 1 note : melanoma associated antigen recognized by T-cells 1 product : melan-A protein_id : NP_084269.1

name	9930021J03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370256 GeneID:240613 MGI:2444398
definition	codon_start : 1 product : hypothetical protein LOC240613 protein_id : NP_766424.1

name	Ranbp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53850664 GeneID:240614 MGI:2683212
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAN binding protein 6 protein_id : NP_808389.2

name	Il33 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527000 CCDS:CCDS29740.1 GeneID:77125 MGI:1924375
definition	GO_component : GO:0005615 - extracellular space [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : nuclear factor from high endothelial venules product : interleukin 33 protein_id : NP_598536.1

name	Trpd52l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385202 CCDS:CCDS29741.1 GeneID:66745 MGI:1913995
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 product : protein kinase NYD-SP25 protein_id : NP_080017.1

name	Uhrf2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430766 GeneID:109113 MGI:1923718
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0004842 - ubiquitin-protein ligase activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0030154 - cell differentiation [Evidence ISS]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0051865 - protein autoubiquitination [Evidence ISS]; GO:0006464 - protein modification [Evidence IEA]; GO:0051726 - regulation of cell cycle [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence ISS] codon_start : 1 note : nuclear zinc finger protein Np97 product : Np95-like ring finger protein protein_id : NP_659122.2

name	Gldc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20070408 GeneID:104174 MGI:1341155
definition	GO_component : GO:0005961 - glycine dehydrogenase complex (decarboxylating) [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence TAS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006544 - glycine metabolism [Evidence IEA] codon_start : 1 product : glycine decarboxylase protein_id : NP_613061.1

name	EG625917 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82998399 GeneID:625917 MGI:3644512
definition	codon_start : 1 product : hypothetical protein protein_id : XP_898214.1

name	Mbl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754656 CCDS:CCDS29742.1 GeneID:17195 MGI:96924
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005537 - mannose binding [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : mannose binding lectin, liver (C) product : mannose binding lectin (C) protein_id : NP_034906.1

name	LOC100042088 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270423 GeneID:100042088
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477600.1

name	Dkk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542557 CCDS:CCDS29744.1 GeneID:13380 MGI:1329040
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] [Evidence ISS]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0050750 - low-density lipoprotein receptor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030326 - embryonic limb morphogenesis [Evidence IGI]; GO:0030178 - negative regulation of Wnt receptor signaling pathway [Evidence IDA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : dickkopf homolog 1 protein_id : NP_034181.2

name	Prkg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62177131 CCDS:CCDS29745.1 GeneID:19091 MGI:108174
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0030553 - cGMP binding [Evidence IDA] [Evidence IEA]; GO:0004692 - cGMP-dependent protein kinase activity [Evidence IEA] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016358 - dendrite development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 note : alpha isoform is encoded by transcript variant 1 product : protein kinase, cGMP-dependent, type I alpha isoform protein_id : NP_001013855.1

name	Prkg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755156 CCDS:CCDS29746.1 GeneID:19091 MGI:108174
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0030553 - cGMP binding [Evidence IDA] [Evidence IEA]; GO:0004692 - cGMP-dependent protein kinase activity [Evidence IEA] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016358 - dendrite development [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 note : beta isoform is encoded by transcript variant 2 product : protein kinase, cGMP-dependent, type I beta isoform protein_id : NP_035290.1

name	LOC100042006 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042006
definition	number : 1 pseudo : _no_value

name	LOC100042006 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042006
definition	number : 2 pseudo : _no_value

name	LOC100042006 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042006
definition	number : 3 pseudo : _no_value

name	LOC668020 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668020
definition	number : 1 pseudo : _no_value

name	LOC545262 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149270482 GeneID:545262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 2177 ESTs, 10 Proteins product : similar to elongation factor 1A pseudo : _no_value transcript_id : XR_033850.1

name	EG546723 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149270327 GeneID:546723 MGI:3645534
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG546723 pseudo : _no_value transcript_id : XR_035115.1

clone name	MSMg01-463J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075J15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-079N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414M10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-168L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190O02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-235I16.T7 (MSMg01no235_i16.b1)	MSMg01-235I16.TJ (MSMg01no235_i16.g1)
ACC	AG401082	AG401083
length	735	737
length of high quality (start - end)	314 (46 - 359)	286 (77 - 362)
definition	CHROMAT_FILE: MSMg01no235_i16.b1 PHD_FILE: MSMg01no235_i16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:52:54 2005	CHROMAT_FILE: MSMg01no235_i16.g1 PHD_FILE: MSMg01no235_i16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:52:54 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCTTTCACTTGTAGTCTCTAGTTGGTATTCTAAAAATATGTTCCACG AAGACACATAGTTAGAGTCTAGGTGCTATCAATAGAGAATTCTACAAACT TCTCACAAATATGGCCCTGGGAGGTAACCAAATATTATGAATTATATTAT TTTTCAGGTGTTTTCTATAAATTGTTTTTTATATATCTGACACATCTTAT ATCAATCTCATTCATTTGCTCTTTGGATATTGATTCAATTTTTTTAAAAT TAGTATCGGATGACTAACAAGAGGTCTCTCCCAAAAGACATACTCTCAAA TGGCTTCTAATTTTTCAACTCTCTCACCCTTTTATTGTGCTATTTTTTCC AACTTGATTAATTATAACTATGCTTTTGCTCATGATATTAATCATTTTTA AACGATTTAAACATACTTATTCTTCAAAGTCCTTTATTCTTTGTGAAATC TTCCCATTGGCATACAATGAATGAGTTTCTTATTTTTATTGTATGGTCTT ATTAAATTGAAAAGGCTGTTTATCAGTTTTAATTTCAGATTTATTTACTC TTATAAGTTTTTGTCTGCATGTATACTACAGTGTTCCTGGTGCAGCAAAG TCCAGCAGAGTCTCAGATCCCTTGAAAGTGAAGTTGCAGGTGGCTGTGAG CACCTTGTGGGTGCTAGGAACTGAACTCAGGTTCC	CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXTTCTGACAAATGGGAGAGTCTACA CAGATACTTAAAAGAACAGCCAAGATACAAGAATTTACTAAGGCCTAGGA AATAGGGGGGGTTGTGGTATTGCATTATTCATGAGAAGGTCTGCTAGAGC AGAACCCCCTGGTGCTAGCCTTCACAAGGCTCAAAGGAGTAGCACAAATT CTGACTAGGGTGTGAAATCCTTAACTGTCATTAGCTAACCCTAGGCAGGA CTGCTTTATCATTACTGTAAACATTCACCTGGTTCCTGTAAGTCCCTTTG TAGTCATTCCTTTGTTTTGCCCCCCCCCCCCTCAATGTACTTTGCCTGCT GTGACTTCCTACCCCCCCCATTTTCTGAATTATATAAGACTGGTGTTCAC TTTGTGACATACATTCAGATTCTACACAATCTCCTGGGTGCATCTGTCTG TCATTTCCGCTGACTCCTTGCCCATCTGCACCCAGAGACTCGTTCCACGC AGACCAAGGGACCCAGAGGCTCTGCGGCAGGAGGAAGGTGTGTGTGTACC AGTGTCAGGAGAGCCCGTCAGTTCCCCAGCAGTACTTTCTAGAGTTTCTT CATCTTTCTCTTTCTTCTTGGGAGCATAACCACAATCATAGGTTTCTGAA CATTCTGGTGCAAAGTCTCTAACCGCAATTTGAAGAC
quality values	Open. Hide. 9 10 9 9 10 15 23 33 43 39 37 37 37 31 31 37 37 32 32 28 30 32 33 37 46 30 24 26 26 26 35 39 53 50 50 50 57 57 57 57 42 42 28 26 26 42 43 57 68 47 47 47 47 50 51 68 51 51 50 50 50 51 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 51 68 68 50 51 51 51 51 51 68 68 51 51 51 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 50 50 50 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 46 42 39 35 35 35 35 37 42 43 59 59 68 68 68 68 59 59 59 59 59 57 57 57 57 57 57 59 59 59 57 57 57 53 50 50 59 59 59 41 36 25 25 10 8 8 8 8 8 10 21 18 16 10 8 8 6 6 6 6 6 6 6 7 13 12 14 15 21 30 30 44 59 59 59 59 59 59 59 59 59 59 59 53 53 53 53 53 53 59 59 59 68 68 68 68 68 68 59 59 54 47 47 39 43 43 43 43 48 47 43 39 39 37 37 37 39 42 44 57 59 59 59 59 59 59 57 48 47 47 48 57 57 57 57 48 48 57 59 59 59 68 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 57 57 68 68 68 57 57 57 57 57 54 54 54 57 57 68 68 68 68 68 68 68 68 68 68 68 57 57 57 59 59 59 59 59 48 48 48 59 57 48 48 59 57 57 48 48 48 48 48 48 43 48 48 47 47 47 47 59 44 44 37 37 39 39 41 41 47 47 59 59 48 48 48 57 57 57 57 57 47 59 39 39 39 41 39 41 39 37 36 39 34 37 41 43 37 37 32 32 32 36 36 35 30 29 37 37 37 37 41 41 37 37 39 37 37 39 39 35 35 35 35 35 39 47 39 42 39 39 30 30 25 31 31 39 36 37 37 27 29 17 18 18 21 30 27 24 24 25 30 25 25 22 21 15 8 8 8	Open. Hide. 9 9 9 9 10 10 10 10 11 23 23 37 37 39 48 57 57 57 50 53 57 48 47 53 53 50 50 50 50 50 48 48 48 48 48 48 48 43 42 41 41 41 41 42 54 54 57 57 54 54 54 54 54 50 57 57 57 57 68 57 57 36 48 41 41 41 42 59 57 57 50 50 50 50 50 50 57 57 57 57 48 48 46 50 42 50 57 57 57 57 68 57 57 57 57 57 57 50 50 50 50 50 57 57 57 57 59 68 68 68 68 68 68 68 51 51 50 50 50 50 57 57 50 50 50 50 50 57 68 68 57 57 57 57 57 57 68 68 68 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 68 62 59 57 57 57 57 57 68 68 68 68 68 59 59 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 57 57 59 57 57 57 57 57 57 57 52 52 52 59 57 57 57 59 57 68 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 59 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 59 68 68 68 68 68 68 57 57 59 59 59 59 59 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 59 59 47 40 26 18 13 13 13 12 27 23 35 39 47 59 48 59 59 59 59 59 59 48 59 59 59 59 59 57 57 57 59 59 43 43 43 43 40 40 46 27 27 16 12 14 12 27 11 11 11 23 21 18 16 13 13 15 21 27 20 11 11 10 10 8 8 12 9 14 18 34 34 39 41 41 47 59 59 48 48 48 59 59 59 59 48 57 57 57 57 50 50 59 59 59 59 59 59 34 34 18 17 15 14 14 14 15 24 19 15 15 14 14 14 15 18 21 24 24 30 30 47 47 47 37 28 29 13 13 13 15 15 20 24 28 37 37 37 39 39 43 41 41 40 43 43 36 36 43 43 48 48 48 48 57 57 57 43 43 39 39 39 42 46 48 57 57 57 57 57 57 48 48 48 59 59 59 68 68 68 68 68 59 59 57 57 48 48 42 44 39 39 37 35 35 35 42 42 57 57 57 57 57 59 44 44 43 44 44 44 44 32 25 25 36 36 44 44 37 37 37 37 37 59 59 57 47 47 47 47 43 46 39 37 32 21 21 14 24 18 31 32 36 30 30 30 30 29 24 24 22 22 29 24 30 30 39 34 34 25 22 17 15 15 12 15 19 23 14 10 10 10 10 11 13 13 11 11 12 21 15 19 18 15 12 11 18 18 22 28 24 18 12 10 10 10 12 20 26 30 28 23 19 15 15 19 19 24 30 30 32 23 19 24 19 17 18 16 16 26 23 22 10 10 10 8 8 8 8 8 11 19 21 28 28 33 32 39 25 23 11 11 10 21 15 24 23 19 12 10 10 24 23 28 37 37 37 27 16 13 8 8 8 8 10 12 12 10 10 10 9 13 10 10 9 8 8 8 8 7 6 8 8 8 8 6 6 8 6 9 10 9 8 6 6 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 9 12 16 16 24 18 13 12 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no235_i16.b1 MSMg01no235_i16.b1 CHROMAT_FILE:
MSMg01no235_i16.b1 PHD_FILE: MSMg01no235_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:54 2005
         (314 letters)



>mm_chr19_29822893_29823606
          Length = 714

 Score =  600 bits (310), Expect = e-176
 Identities = 310/310 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttcacttgtagtctctagttggtattctaaaaatatgttccacgaagacacat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcacttgtagtctctagttggtattctaaaaatatgttccacgaagacacat 264

                                                                       
Query: 65  agttagagtctaggtgctatcaatagagaattctacaaacttctcacaaatatggccctg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agttagagtctaggtgctatcaatagagaattctacaaacttctcacaaatatggccctg 324

                                                                       
Query: 125 ggaggtaaccaaatattatgaattatattatttttcaggtgttttctataaattgttttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaggtaaccaaatattatgaattatattatttttcaggtgttttctataaattgttttt 384

                                                                       
Query: 185 tatatatctgacacatcttatatcaatctcattcatttgctctttggatattgattcaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tatatatctgacacatcttatatcaatctcattcatttgctctttggatattgattcaat 444

                                                                       
Query: 245 ttttttaaaattagtatcggatgactaacaagaggtctctcccaaaagacatactctcaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttttaaaattagtatcggatgactaacaagaggtctctcccaaaagacatactctcaa 504

                     
Query: 305 atggcttcta 314
           ||||||||||
Sbjct: 505 atggcttcta 514


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space:   215025
Effective search space used:   215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information