Query= MSMg01no235_i17.b1 MSMg01no235_i17.b1 CHROMAT_FILE:
MSMg01no235_i17.b1 PHD_FILE: MSMg01no235_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:54 2005
(314 letters)
>mm_chr19_41775985_41776698
Length = 714
Score = 553 bits (286), Expect = e-162
Identities = 304/310 (98%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 5 gaattctaaaggttttcctatacctaaagaagacagggcagttgggtgggctccaggggt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaaaggttttcctatacctaaagaagacagggcagttgggtgggctccaggggt 264
Query: 65 gttccggctcacctcccaagttcaagaaaggattggggtaatgggtaagttggtactgga 124
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttccggcacaactcccaagttcaagaaaggattggggtaatgggtaagttggtactgga 324
Query: 125 gtggaactagtctggaactctccatatagcctaagctatatggtgaacttatgatagtcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtggaactagtctggaactctccatatagcctaagctatatggtgaacttatgatagtcc 384
Query: 185 tcctatctccagtcacctaagactgagattacgagtgcgagccgccatctcaatctccat 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 tcctatctccagtcacctaagactgagactacgagtgcgagccgccatctcaatctccat 444
Query: 245 atgctctctccttactttaaagatgtctattatttggatcgaagtcttggtgaaatccat 304
|||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||
Sbjct: 445 atgctctctccttactttaaagatgtctatgaat-ggatcgaagtcttggtgaaatccat 503
Query: 305 ccttggctct 314
||||||||||
Sbjct: 504 ccttggctct 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_i17.g1 MSMg01no235_i17.g1 CHROMAT_FILE:
MSMg01no235_i17.g1 PHD_FILE: MSMg01no235_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:54 2005
(285 letters)
>mm_chr19_41941876_41942560
Length = 685
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%)
Strand = Plus / Minus
Query: 1 ttggaaccttcacaggggtcctggtgatctgttgacagctgcctctccttcctggcccgc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 484 ttggaaccttcacaggggtcctggtgatctgttgacagctgcctcttcttcctggcccgc 425
Query: 61 aaggactgaccagagtcctctgtagatggatctcagcttagagatagaaagatcagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aaggactgaccagagtcctctgtagatggatctcagcttagagatagaaagatcagacat 365
Query: 121 ctcctaaagcagcaagagcagtatagtgatgaccacatagtggctgggtcctacagtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctcctaaagcagcaagagcagtatagtgatgaccacatagtggctgggtcctacagtcag 305
Query: 181 ctcctgcctccagcatcccaaagttctctgtggcagtcgctgagtcctcctgtgcgcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ctcctgcctccagcatcccaaagttctctgtggcagtcgctgagtcctcctgtgcgcatg 245
Query: 241 gttccggagcataagatgcttggggccacgacatccttggtgga 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gttccggagcataagatgcttggggccacgacatccttggtgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
