Query= MSMg01no263_c15.b1 MSMg01no263_c15.b1 CHROMAT_FILE:
MSMg01no263_c15.b1 PHD_FILE: MSMg01no263_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:00 2005
(298 letters)
>mm_chr19_44344680_44345377
Length = 698
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%)
Strand = Plus / Plus
Query: 1 ggaagatgttgctgagttgaaagcctgggatacagttgagattctgttgcctgtgatact 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 ggaagatgttgctgagttgaaagcctgggatacagttgagagtctgttgcctgtgatact 260
Query: 61 gggctgcacacaccaaatggtctgatggcaggttgatgggtgccagcgatgtcctgtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggctgcacacaccaaatggtctgatggcaggttgatgggtgccagcgatgtcctgtggg 320
Query: 121 tttatatgtgaggtatctctcctactaagtggtctcggtgagaggatatatcctttgttg 180
|||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 321 tttatacgtgaggtatctctcctattaagtggtctcggtgaaaggatatatcctttgttg 380
Query: 181 gtctggtgtgtccgatagcttcatagacctggtctttctggtatggttttcatctgccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctggtgtgtccgatagcttcatagacctggtctttctggtatggttttcatctgccaa 440
Query: 241 tgtatctgtatgttcctgacttactttttctaagtttgtaggtggtg 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtatctgtatgttcctgacttactttttctaagtttgtaggtggtg 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_c15.g1 MSMg01no263_c15.g1 CHROMAT_FILE:
MSMg01no263_c15.g1 PHD_FILE: MSMg01no263_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:00 2005
(627 letters)
>mm_chr19_44498396_44499422
Length = 1027
Score = 919 bits (475), Expect = 0.0
Identities = 499/511 (97%), Gaps = 8/511 (1%)
Strand = Plus / Minus
Query: 1 tcttaagccgagaagcctcggatgttgcatgttgttatatacacgaaattcccaggatcc 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tcttaaaccgagaagcctcggatgttgcatgttgttatatacacgaaattcccaggatcc 449
Query: 61 cccttgcctcacacagatgaatactgcctgggaggtacagacgtttcacacactcgtgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cccttgcctcacacagatgaatactgcctgggaggtacagacgtttcacacactcgtgcc 389
Query: 121 tctcacaggcagatgctcacaggcagcggctactcacacagacagacgtccacaaggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tctcacaggcagatgctcacaggcagcggctactcacacagacagacgtccacaaggaac 329
Query: 181 acgatgcacaccacaagctccctcaggtggtcttgacatagagatctctgttctcggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acgatgcacaccacaagctccctcaggtggtcttgacatagagatctctgttctcggctg 269
Query: 241 tgctctcagtcagtgttatcccacacagtcctacaggcaaagaagcccagagtccccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgctctcagtcagtgttatcccacacagtcctacaggcaaagaagcccagagtccccaac 209
Query: 301 agcacatcttttttttaatc-----ttttttaaaacagatttatcttatctattatatgt 355
|||||||||||||||||||| |||||||| ||||||||||||| ||||||||||
Sbjct: 208 agcacatcttttttttaatctttttttttttaa---agatttatcttatttattatatgt 152
Query: 356 aagtacactgtagctgtcttcagacactccagaagagggcgtcagatctcattacgaatg 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 aagtacactgtagctgtcttcagacactccagaagagggcgtcagatctcattacgaatg 92
Query: 416 gttgtgagccaccatgtggttgctaggatttgaactcagaacctttggaagagcagtcag 475
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 91 gttgtgagccaccatgtggttgctgggatttgaactcagaacctttggaagagcagtcag 32
Query: 476 tgctcttaaccactgagccatctctccagcc 506
||||||||||| |||||||||||||||||||
Sbjct: 31 tgctcttaaccgctgagccatctctccagcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space: 627489
Effective search space used: 627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
