TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTAGTCTTTCTCTCCATTGTGTTGCAAATGCCTTGGGAGAAACTT
TCAAATTAAGTTCGAAGACTACAGCTTCAATTTCCTTTCCAACCCTACAT
ATTTGAGAGAGTTCGCTTTTCTAATAGGATCTCCAAGGAAGTTCATAATT
TCTGCTTTTAGATGTCCGTTTTTTGTCTTTTATTTTTGAGATTTTAATTA
CATCATTTCTCCCTTGTCTTTCCTTCCTCCAAACCCTCCCATGCAATTAC
ATCAAGTGGTAGTTCATCTCACTGTTGTTTAGAGTGGTTGCTTCGCAAAT
GATTGTCCTCCATTTTCATTCCTTTCTTCTTAAGCTCCCAGAAGATCTTG
TGGGACATGTATTTACATTTGTAAATCTTCAGAGGTAGGAAGGACTCAGA
GCTCCAAAAATGTCACCTGTGGAATAGGTGTCATCTAGTCATCTTCTATA
GAGACTACTAGAAGAAAGAGAAAATAGCCACATTTTCCTTCTCACACCTT
CCCTCTTTGTTAAATTTGTTAACAAATTAGATACACTTGAGGAATAACAT
ATAAGTAGTTTTTATTCACCGGAAGTAATTGTCATCTTATGTCAGGCTTA
TGGTTGAATATGCTCACTCTTTCTAGTCCTTTCTGATCTCTGGCTGGCTG
GTTCAACTCAGGTGTTCTGGCTTAAAACTCCTCTCTA

TCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCTTCATATGGCTACCTTCTTTTA
GGTTTGTTGAAAGATTACTTTCTTGCTTTTTCTAGGGTGTAGTTTCCCTC
CTTGCATTGGAGTTTTCCCTTTATTATCCTTTGAAGGGCTGGATTTGTGG
AAAGATATTGTGTAATTTTGGTTTTGTCATGTGATATCTTGGTTTCTCCT
TCTATGTTAACTGAGAGTTTTGCTGGGTATAGTAGCCTGGGCTGGCATTT
GTGTTCTCTTAGGGTCTGTATGACATCTGCCCAGAATCTTCTAGCTTTCA
TAGTCTCTGGCAAGAATTCTGGTATACCTCTGACAGGTCTACCTTTATAT
GTTACTTGATCTTTACTTACCACTTTTAATATTCTTTCTTTGTTTTGTGC
ATTTGGTGTTTTGATTCTTATGTTATAGGAGGAACTTTTTTTCTGTTCCA
AACTATTTGGAATTCTGTATGCTTCTTCTATGTCCATGCGCATCTATTTC
TTCAGGTTGGCGAAGTTTTTTTTTTTCCGCTATTCTGCTGCAGATATTCT
CTGCCCCTTTATGCTGCAAATCTTTCCCCTCTCCCTATACTTATTATCAT
TAGTTTTGGCTCTTTCACTGTGTCTTAGTTTTTATTTCGATTCGTCTTTT
TTTGCGACCCCCCTTCCTCGCCTACTTTTTTCTTTC

Query= MSMg01no266_b06.b1 MSMg01no266_b06.b1 CHROMAT_FILE:
MSMg01no266_b06.b1 PHD_FILE: MSMg01no266_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:46 2005
         (693 letters)



>mm_chr19_35607277_35608369
          Length = 1093

 Score = 1303 bits (674), Expect = 0.0
 Identities = 686/690 (99%)
 Strand = Plus / Minus

                                                                        
Query: 4    ggaattcactagtctttctctccattgtgttgcaaatgccttgggagaaactttcaaatt 63
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 ggaattcactagtctttctctccattgtgttgcaaatgccttgggagaaactttcaaatt 941

                                                                        
Query: 64   aagttcgaagactacagcttcaatttcctttccaaccctacatatttgagagagttcgct 123
            ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 940  aagttcgaagactacagtttcaatttcctttccaaccctacatatttgagagggtttgct 881

                                                                        
Query: 124  tttctaataggatctccaaggaagttcataatttctgcttttagatgtccgttttttgtc 183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880  tttctaataggatctccaaggaagttcataatttctgcttttagatgtccgttttttgtc 821

                                                                        
Query: 184  ttttatttttgagattttaattacatcatttctcccttgtctttccttcctccaaaccct 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820  ttttatttttgagattttaattacatcatttctcccttgtctttccttcctccaaaccct 761

                                                                        
Query: 244  cccatgcaattacatcaagtggtagttcatctcactgttgtttagagtggttgcttcgca 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760  cccatgcaattacatcaagtggtagttcatctcactgttgtttagagtggttgcttcgca 701

                                                                        
Query: 304  aatgattgtcctccattttcattcctttcttcttaagctcccagaagatcttgtgggaca 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700  aatgattgtcctccattttcattcctttcttcttaagctcccagaagatcttgtgggaca 641

                                                                        
Query: 364  tgtatttacatttgtaaatcttcagaggtaggaaggactcagagctccaaaaatgtcacc 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640  tgtatttacatttgtaaatcttcagaggtaggaaggactcagagctccaaaaatgtcacc 581

                                                                        
Query: 424  tgtggaataggtgtcatctagtcatcttctatagagactactagaagaaagagaaaatag 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 580  tgtggaataggtgtcatctagtcatcttctatagagactactagaagaaagagaaaataa 521

                                                                        
Query: 484  ccacattttccttctcacaccttccctctttgttaaatttgttaacaaattagatacact 543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520  ccacattttccttctcacaccttccctctttgttaaatttgttaacaaattagatacact 461

                                                                        
Query: 544  tgaggaataacatataagtagtttttattcaccggaagtaattgtcatcttatgtcaggc 603
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460  tgaggaataacatataagtagtttttattcaccggaagtaattgtcatcttatgtcaggc 401

                                                                        
Query: 604  ttatggttgaatatgctcactctttctagtcctttctgatctctggctggctggttcaac 663
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400  ttatggttgaatatgctcactctttctagtcctttctgatctctggctggctggttcaac 341

                                          
Query: 664  tcaggtgttctggcttaaaactcctctcta 693
            ||||||||||||||||||||||||||||||
Sbjct: 340  tcaggtgttctggcttaaaactcctctcta 311


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space:   739689
Effective search space used:   739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)