Query= MSMg01no266_k21.b1 MSMg01no266_k21.b1 CHROMAT_FILE:
MSMg01no266_k21.b1 PHD_FILE: MSMg01no266_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:31 2005
(203 letters)
>mm_chr19_33304228_33304830
Length = 603
Score = 377 bits (195), Expect = e-109
Identities = 201/203 (99%)
Strand = Plus / Plus
Query: 1 ataaaataaatcctaaaaagaaagtataggtatatttgtaattatcatatttaaaagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaaataaatcctaaaaagaaagtataggtatatttgtaattatcatatttaaaagaca 260
Query: 61 ggttcataaagcaataaatataaatttacattggtatgtacataacatattaaatgtgtg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 ggttcataaagcaataaatataaatttacattggtatgtatataacatattaaatgtgtg 320
Query: 121 gtttgtatgaccataaaagcaccagggaaggggcagagaataaacaggaggacagagttt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gtttgtatgaccataaaagcaccagggaaggggcagagaataaacaggaggaaagagttt 380
Query: 181 gtataatattaaagttaatataa 203
|||||||||||||||||||||||
Sbjct: 381 gtataatattaaagttaatataa 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no266_k21.g1 MSMg01no266_k21.g1 CHROMAT_FILE:
MSMg01no266_k21.g1 PHD_FILE: MSMg01no266_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:31 2005
(290 letters)
>mm_chr19_33459719_33460409
Length = 691
Score = 542 bits (280), Expect = e-158
Identities = 286/288 (99%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 3 tgcctggcatggagatgggaaaatactagtgggtagctaggacacagccaggcatccaga 62
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 490 tgcctggcatggagatgggaaaatactagtgggtagctaggacacagcaaggcatccaga 431
Query: 63 tattttggattgatgtcaaatgagggccaaagataatgatgctgaaggacatcataggca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tattttggattgatgtcaaatgagggccaaagataatgatgctgaaggacatcataggca 371
Query: 123 gagagaatcaga-ttgagctgggcttctgcagaattggaactgcacagggaagctggact 181
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gagagaatcagatttgagctgggcttctgcagaattggaactgcacagggaagctggact 311
Query: 182 tatgctggagtcttagcaactgggaaggtgaaatgtctccgtgaggatggatactgactt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tatgctggagtcttagcaactgggaaggtgaaatgtctccgtgaggatggatactgactt 251
Query: 242 ccctgtgcttttgatctttaccattgtgttgtgatcttttcacatatc 289
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ccctgtgcttttgatctttaccattgtgttgtgatcttttcacatatc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 691
Length adjustment: 9
Effective length of query: 281
Effective length of database: 682
Effective search space: 191642
Effective search space used: 191642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
