Query= MSMg01no269_c16.b1 MSMg01no269_c16.b1 CHROMAT_FILE:
MSMg01no269_c16.b1 PHD_FILE: MSMg01no269_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:34 2005
(320 letters)
>mm_chr19_28160189_28160907
Length = 719
Score = 540 bits (279), Expect = e-158
Identities = 306/315 (97%), Gaps = 2/315 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtagaccaagctggccttgaactcagaaatctgcctgcctctgcctcc 63
||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 205 ggaattcactctgtaaaccaagctggcctcgaactcagaaatccgcctgcctctgcctcc 264
Query: 64 cgagtgctgggattaaaggcatgcgctaccacgcccggccttgcacaggcttatttaagt 123
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 265 cgagtgctgggattaaaggcatgcgccaccacgcc-ggccttgcacaggcttatttaagt 323
Query: 124 tggagatttacgacaatatgatcgtcttctacaaagaaatactgggacctcaaggatgac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggagatttacgacaatatgatcgtcttctacaaagaaatactgggacctcaaggatgac 383
Query: 184 ctaaaagatttgagataccaaaggccaatcgatatctttgttgaacaaattagcatttat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctaaaagatttgagataccaaaggccaatcgatatctttgttgaacaaattagcatttat 443
Query: 244 ccatcaagtggaatcctatgctgtcatttaaaaaaagatagaattagctggaaggcaggt 303
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |
Sbjct: 444 ccatcaagtggaatcctatgctgtcattaaaaaaaa-atagaattagctggaaggcagat 502
Query: 304 atgatgacaggcagg 318
||||||| |||||||
Sbjct: 503 atgatgagaggcagg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_c16.g1 MSMg01no269_c16.g1 CHROMAT_FILE:
MSMg01no269_c16.g1 PHD_FILE: MSMg01no269_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:34 2005
(645 letters)
>mm_chr19_28187188_28188233
Length = 1046
Score = 1139 bits (589), Expect = 0.0
Identities = 631/645 (97%), Gaps = 1/645 (0%)
Strand = Plus / Minus
Query: 1 cattgtctgtattttcagtggttctaaatttggagacagtaaggttagactcctgttgac 60
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 845 cattgtctgtattttcagtggttctaaatttggagagagtaagggtagactcctgttgac 786
Query: 61 ttcagaaaatctccaaaagctggcttatccaagttgtgtcagatagaattctcatagagc 120
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 ttcggaaaatccccaaaagctggcttatccaagttgtgtcagatagaattctcatagagc 726
Query: 121 aacaatgaaagaagacacatttccaggactgttgatcatgtggaagatagaggttgtggc 180
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 725 aacaatgaaagaagacacatttccaggactgttgatcacgtggaaaatagaggttgtggc 666
Query: 181 ttaggccacagagcataatctcatcggcagaatttgtaggtaaggtctacttgaaagcag 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 665 ttaggccacagagcataatctcatcagcagaatttgtaggtaaggtctacttgaaagcag 606
Query: 241 ggtcctggaaaatgacgtccagcattatcagaagagattactggtggctctgggattaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ggtcctggaaaatgacgtccagcattatcagaagagattactggtggctctgggattaaa 546
Query: 301 tagagcatcctggcttcttggatgagagaatcaactagc-ttttttatttgaaagtcatt 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 545 tagagcatcctggcttcttggatgagagaatcaactagctttttttatttgaaagtcatt 486
Query: 360 tatgaagggcttggacttgactcagactattatgttgagaccgacagacagatttttcca 419
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 485 tatgaagggcttggacttggctcagactattatgttgagaccgacagacagattttccca 426
Query: 420 tcagagctgtaatttagagtcagtcttcccctgtgtgaaggttttgctcttagtgcaaca 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tcagagcagtaatttagagtcagtcttcccctgtgtgaaggttttgctcttagtgcaaca 366
Query: 480 acatgactctcctctgccagagtgctatgttagttcattatccctacggcagagttagta 539
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 365 acatgactctcctctgccagagtgctatgttagttcattatccctatggcagagttagta 306
Query: 540 gacaggattaaataagccaagggagactaagggattgccccttatgagcaaaactagaga 599
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gacaggattaaataaaccaagggagactaagggattgccccttatgagcaaaactagaga 246
Query: 600 gggaactgaaaaaaagatgagcactgtctgctagtgtaactgtca 644
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 245 gggaactgaaaaaaagatgagcactgtctgctagtgtacctgtca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space: 657860
Effective search space used: 657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
