Query= MSMg01no272_d05.b1 MSMg01no272_d05.b1 CHROMAT_FILE:
MSMg01no272_d05.b1 PHD_FILE: MSMg01no272_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:17 2005
(322 letters)
>mm_chr19_55619981_55620702
Length = 722
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%)
Strand = Plus / Plus
Query: 4 ggaattcactggcttgctgcagcaagaggcagatagagggcgctgtggagctctcgtgaa 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactggcttgctgaagcaagaggcagatagagggcgctgtggagctctcgtgaa 263
Query: 64 cagtgttcacttctagctcaccagctgaatgagcctagcttccgcagacaaggctaacac 123
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagtgttcacttctagcttagcagctgaatgagcctagcttccgcagacaaggctaacac 323
Query: 124 aggattgaactggccaaaaagctgctcaaacagaaatattgtaccttaaagtactactaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggattgaactggccaaaaagctgctcaaacagaaatattgtaccttaaagtactactaa 383
Query: 184 agcatcaacttgtttgaacagtgcttggccgttgtaaagcacttgacttacacttttaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agcatcaacttgtttgaacagtgcttggccgttgtaaagcacttgacttacacttttaat 443
Query: 244 tcgctgttcacaagtatgttttgtactgtgcttggccgtcgtaaagcacttgacttacac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcgctgttcacaagtatgttttgtactgtgcttggccgtcgtaaagcacttgacttacac 503
Query: 304 ttttaattcactgttcac 321
||||||||||||||||||
Sbjct: 504 ttttaattcactgttcac 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no272_d05.g1 MSMg01no272_d05.g1 CHROMAT_FILE:
MSMg01no272_d05.g1 PHD_FILE: MSMg01no272_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:11:17 2005
(298 letters)
>mm_chr19_55804396_55805094
Length = 699
Score = 526 bits (272), Expect = e-154
Identities = 290/296 (97%), Gaps = 1/296 (0%)
Strand = Plus / Minus
Query: 1 ttttcatggtctagacatgaagatcatctgtatgtatgggaaatatttcctgtgtagttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ttttcatggtctagacatgaagatcatctgtatgtatgggaaatatttcctgtgtagttg 437
Query: 61 ctttcttgctctcatagaggtacatgaatggcattttgaagacagaaaacaaatcttaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctttcttgctctcatagaggtacatgaatggcattttgaagacagaaaacaaatcttaac 377
Query: 121 ttcctttgtggccggtgtttttgtgaaattgttcctgatggcgaagacattcctaatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 376 ttcctttgtggccggtgtttttgtgaaattgttcctgatggcgaagacattcctagtgtg 317
Query: 181 accatctaaaaaa-ctggctgtttgtctctcgcgcgtgcagattaaatggattaattttg 239
|||| |||||||| ||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 316 accaactaaaaaaactggctgtttgtctctctcgtgtgcagattaaatggattaattttg 257
Query: 240 ttgtctttttattagtttttaaaatcagacccaatatgatgccgggtcctttgtta 295
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 256 ttgtctttttattagtttttaaaatcagacccaatgtgatgccgggtcctttgtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 699
Length adjustment: 9
Effective length of query: 289
Effective length of database: 690
Effective search space: 199410
Effective search space used: 199410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
