Query= MSMg01no279_g21.b1 MSMg01no279_g21.b1 CHROMAT_FILE:
MSMg01no279_g21.b1 PHD_FILE: MSMg01no279_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:01 2005
(381 letters)
>mm_chr19_23647237_23648017
Length = 781
Score = 679 bits (351), Expect = 0.0
Identities = 369/377 (97%), Gaps = 6/377 (1%)
Strand = Plus / Minus
Query: 5 gaattctcatatctctcaagctctcgggcactgatgctgccaggaagcaacactgagaaa 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 gaattctcataactctcaagctctcgggcactgatgctgccaggaagcaacactgagaaa 700
Query: 65 gctggcagtagctgctggttaccaccaagctaaatcttccacccagatccattagcctgc 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gctggcagtagttgctggttaccaccaagctaaatcttccacccagatccattagcctgc 640
Query: 125 ctaaattggattttgttgttttgaacaaaacaacaacaacaaacaaacaaacaaacaaac 184
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 639 ctaaattggattttgttgttttgaacaaaacaacaacaac-aac-aacaaacaaacaaac 582
Query: 185 aaaaacaacagcaacaaaaagaaaaccaagaaaatctagatattttctttgactatccat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ----acaacagcaacaaaaagaaaaccaagaaaatctagatattttctttgactatccat 526
Query: 245 ttctaaaatattgctgggaacacaagtacagtttcatttttatagaagaacaaattattc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttctaaaatattgctgggaacacaagtacagtttcatttttatagaagaacaaattattc 466
Query: 305 tttacccagaattctaaatataggaactaggctccttttggcttgtaactggggtttgcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tttacccagaattctaaatataggaactaggctccttttggcttgtaactggggtttgcc 406
Query: 365 tagtctccttaatgtgc 381
|||||||||||||||||
Sbjct: 405 tagtctccttaatgtgc 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_g21.g1 MSMg01no279_g21.g1 CHROMAT_FILE:
MSMg01no279_g21.g1 PHD_FILE: MSMg01no279_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:01 2005
(648 letters)
>mm_chr19_23478437_23479484
Length = 1048
Score = 1222 bits (632), Expect = 0.0
Identities = 644/648 (99%)
Strand = Plus / Plus
Query: 1 actgagtaaaccatgctaacctcaagactgtggcagccttcctgcttccacctcccgagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgagtaaaccatgctaacctcaagactgtggcagccttcctgcttccacctcccgagg 260
Query: 61 cgaggattacagacttggaccgtcatactgagctttatgcagtgttggggatcaaatcca 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgaggattacagacttggaccatcatactgagctttatgcagtgttggggatcaaatcca 320
Query: 121 ggtctttgtatgcactaaggaacacacgccaacaaaggagctacttccccagtctactcc 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtctttgtatgcgctaaggaacacacgccaacaaaggagctacttccccagtctactcc 380
Query: 181 ttcaactttgttgacacggccaatttatatctctttacttctatgagagggctataaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaactttgttgacacggccaatttatatctctttacttctatgagagggctataaaaa 440
Query: 241 cacagcctcaggacctccttagctctcattttggagctactatagacagaagaaacctag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagcctcaggacctccttagctctcattttggagctactatagacagaagaaacctag 500
Query: 301 aataaattaactgaggtccctcagtcagaacaacaatctttcaccatgtaaacagtttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataaattaactgaggtccctcagtcagaacaacaatctttcaccatgtaaacagtttat 560
Query: 361 ttagtttttagttattgctttttaagtaaagaaaaattgacctaaaatttcagctcttct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttagtttttagttattgctttttaagtaaagaaaaattgacctaaaatttcagctcttct 620
Query: 421 ctctagctggtgatggttgaggtatgtcccctgagcctcctgggccttcacagccctaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctagctggtgatggttgaggtatgtcccctgagcctcctgggccttcacagccctaaa 680
Query: 481 ggacaatctgcaatggaaagtacccattctgttttagcaacggactctgtgccttgagac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggacaatctgcaatggaaagtacccattctgttttagcaacggactctgtgccttgagac 740
Query: 541 ctgacttgacaggaaaggctaagaggattattttgagagaacaatctgttatggagagac 600
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 741 ctgacttgacaggaaaggctaagaggactattttgagagaacaatctgttatggagagac 800
Query: 601 tctggcatgtgcccactcaagggtattataagtcagcattcttccaag 648
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctgtcatgtgcccactcaagggtattataagtcagcattcttccaag 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
