CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAACAAAGGTATCTAGAATGGCCAAGAAGCACTTAAAGAAATGT
TCAAAGTCCTTAGTTATCATTTAAACGCAAATCAAAACAACTCTGAGCTT
CTACCTTACACCCGTCAGAATAGCTAAGATCAAACACTCAAGTTGGCACA
CACTGGCGAGGATGTGGAGAAAGGGGAACACTCCTCCATTGCTGGTGCGA
GTGCAAGCTGGTACCACCACTCTGGAAATCAGTCTGGTGGTTGCTCAGAA
AATTGGGAAACAGTTCTACTTCAAGATCCAGCAATACCATTACAGAGCAT
GTACCCAAAAGATGCCTCATCATCCCACACCCCCACTTGCTCAACTATGT
TCATAGCAGTTTTATGAAACACCTCAGATGCCCCTCAATGGAAGAATGAA
TAAAGAAAACATGGTACATTTACACAATGGAATACTACCCAGCTATTAAA
AACCAGGAAATCATAAAATTTGCAGGCAAATAATTGAACTAGAAAATATC
ATCCTGAATGAGATAACCCAGACCCAGGAAGACATCCATGGTATGTACTC
ACTTATAAATGGATATCAGCCAGAAAATACAGGATAACCTTGCTACAATT
CAGAGACCCAAAGAAGCTAAGCAAACAGGAGAGCTCAAGGGAGGGTACTT
GAATCTCACTCAGAGGGGAAATAAAAAAGATACTGGGTATGGATGGAGAG
AGGGACCTGGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTGGTAGTTTTTAAATAAGAACG
AGATTATGATTGCTATAATCTTGTATGCCCCATCTTTAAATTTCAGAACA
GGAGTTATAACAACAGTTAATAGTCACCTAAATAGTTGTAAAATCTGTAG
TATATTCAGACTTAATTTATTGAGCTCTTAAAAATTACATTAGACTTTTT
CAGACATTAGTTTACCAATTGCCTGGGTATAGTTTGGCTGATGGTAGTAA
TGGTGAGTGCTTTAGCTCAGTTACTATTATATTTGTTTTTTAGAATGTTA
CTTTAAATCTAGTTTTTATTGCTCTCTTGCTTTTAACAATATTTATTTTA
TCTTAATTATATGTATGGGTGTATCTGTTATGTAAGAGTGTGGATATGAG
TGCAGGTACCAGAGGAGGCTAGTAGCTGCTCCACCCATGGTGTGTGCTGG
GAATGAACTTGGGTCCTCTATAAGAGCAGCAAGCACCTTCAAACACTGTG
CCACATCTGAGCCCTCCATTGTGCCTTGTCTCTGAAATGAGACGAGTGTC
TTCCTTCTTCTCTTCAACTACAGAGGGGATGGTGAGATGGGGGTAATTGG
AAAAAAAAATCCAAGTGGAAAGGGAACTAATAACTTTCTTTCTAAAGCAA
GAAGACCATGGAGAATAGTTTGAAAGATTTCCAGATCTGTCATCATATCC
CCCCCACCCCN

Query= MSMg01no280_b10.g1 MSMg01no280_b10.g1 CHROMAT_FILE:
MSMg01no280_b10.g1 PHD_FILE: MSMg01no280_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:51 2005
         (586 letters)



>mm_chr19_59133529_59134514
          Length = 986

 Score =  990 bits (512), Expect = 0.0
 Identities = 548/560 (97%), Gaps = 2/560 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catctttaaatttcagaacaggagttataacaacagttaatagtcacctaaatagttgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 catctttaaatttcagaacaggagttataacaacagttaatagtcacctaaatagttgta 500

                                                                       
Query: 61  aaatctgtagtatattcagacttaatttattgagctcttaaaaattacattagacttttt 120
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 499 aaatctgtagtatattcagacttaatttattgggctcttaagaattacattagacttttt 440

                                                                       
Query: 121 cagacattagtttaccaattgcctgggtatagtttggctgatggtagtaatggtgagtgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cagacattagtttaccaattgcctgggtatagtttggctgatggtagtaatggtgagtgc 380

                                                                       
Query: 181 tttagctcagttactattatatttgttttttagaatgttactttaaatctagtttttatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 379 tttagctcagttactattatatttgttttttagaatgttactttaaatctagtttttaag 320

                                                                       
Query: 241 gctctcttgcttttaacaatatttattttatcttaattatatgtatgggtgtatctgtta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gctctcttgcttttaacaatatttattttatcttaattatatgtatgggtgtatctgtta 260

                                                                       
Query: 301 tgtaagagtgtggatatgagtgcaggtaccagaggaggctagtagctgctccacccatgg 360
           |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tgtaggtgtgtggatatgagtgcaggtaccagaggaggctagtagctgctccacccatgg 200

                                                                       
Query: 361 tgtgtgctgggaa-tgaacttgggtcctctataagagcagcaagcaccttcaaacactgt 419
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tgtgtgctgggaactgaacttgggtcctctataagagcagcaagcaccttcaaacactgt 140

                                                                       
Query: 420 gccacatctgagccctccattgtgccttgtctctgaaatgagacgagtgtcttccttctt 479
           |||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||| |
Sbjct: 139 gccatatctgagccctccgttgtgccttgtctctgaaatgagacgagcgtcttccttcct 80

                                                                       
Query: 480 ctcttcaactacagaggggatggtgagatgggggtaattggaaaaaaaaatccaagtgga 539
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 79  ctcttcaactacagaggggatggtgagatgggggtaattgg-aaaaaaaatccaagtgga 21

                               
Query: 540 aagggaactaataactttct 559
           ||||||||||||||||||||
Sbjct: 20  aagggaactaataactttct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)