Query= MSMg01no292_o15.b1 MSMg01no292_o15.b1 CHROMAT_FILE:
MSMg01no292_o15.b1 PHD_FILE: MSMg01no292_o15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:07 2005
(331 letters)
>mm_chr19_6140160_6140890
Length = 731
Score = 524 bits (271), Expect = e-153
Identities = 307/325 (94%), Gaps = 12/325 (3%)
Strand = Plus / Plus
Query: 7 gaattccctaacatatgcgcttggaggtcatctaatgagtgtctttctcagaattgtcta 66
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattccctaacataggtgcttggaggtcatctaatgagtgtctttctcagaattgtcta 266
Query: 67 aaacacgcacgagtggtaaagttctacgtgcacattaaatttccttttctccctctgcta 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aaacacgcacgagtggtaaagttctacgtgcacattaaatttccttttctccctctgcta 326
Query: 127 ctttgtggatcgcagatgcctaggtggcctggcacagtgcaagacgtaagacgggtgatg 186
||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 327 ctttgtggatcgcagatgcctaggtggcccggcacagtgcaagacg-------ggtgatg 379
Query: 187 caggtgaaatgcaggttaatgcgatgaaaggtcgctggtggccttaagtgacagcgggac 246
|||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 380 caggtgc----cag-ttaatgcggtgaaaggtcgctggtggccttaagtgacagcgggac 434
Query: 247 ctgtggccaaccgagtccacgcctactcgcaggatcctaggcggtcctcgagaccctggg 306
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 435 ctgtggccaaccgagtccacgcctactcgcaggagcctaggcggtcctcgagaccctggg 494
Query: 307 attccgaccctaagggaagcgccaa 331
|||||||||||||||||||||||||
Sbjct: 495 attccgaccctaagggaagcgccaa 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_o15.g1 MSMg01no292_o15.g1 CHROMAT_FILE:
MSMg01no292_o15.g1 PHD_FILE: MSMg01no292_o15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:28:07 2005
(253 letters)
>mm_chr19_6304492_6305144
Length = 653
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%)
Strand = Plus / Minus
Query: 1 ttctgagaaaatcccaaccccaagcaggcttcaacgccataccagagtgggacagaaagg 60
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 302 ttctgagaaaatcccaaccccaagcaggcttcaatgccataccagagtgggagagaaagg 243
Query: 61 ccagagctggactcaattgaacacaccgactggatatggtggctcggtactctgaagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ccagagctggactcaattgaacacaccgactggatatggtggctcggtactctgaagaga 183
Query: 121 cagaaagatctctgagttcaaggccagcctggtgtacatagtgagttttaggatagcccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cagaaagatctctgagttcaaggccagcctggtgtacatagtgagttttaggatagcccg 123
Query: 181 ggctatatataaagaccttgtttcactaattaaataaataactgggcacgccagtcctct 240
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 122 ggctatatataaagaccttgtctcactaattaaataaataactgggcacgccagtcatct 63
Query: 241 caggcactc 249
|||||||||
Sbjct: 62 caggcactc 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
