Query= MSMg01no297_m08.b1 MSMg01no297_m08.b1 CHROMAT_FILE:
MSMg01no297_m08.b1 PHD_FILE: MSMg01no297_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:17 2005
(654 letters)
>mm_chr19_9160054_9161107
Length = 1054
Score = 1241 bits (642), Expect = 0.0
Identities = 648/650 (99%)
Strand = Plus / Minus
Query: 5 gaattccaaggcagaccatttgagacaaggtgagaagtggaggcaaacagtaggaaatca 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaattccaaggcagaacatttgagacaaggtgagaagtggaggcaaacagtaggaaatca 613
Query: 65 tgttcccaagcagacagtacaatccaaagagcacagtggttgcagggaacatggtgatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgttcccaagcagacagtacaatccaaagagcacagtggttgcagggaacatggtgatga 553
Query: 125 ggtgggaggcttgcctgcaaactgactgtgccatcagactagatcccttgtgtgtcttca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggtgggaggcttgcctgcaaactgactgtgccatcagactagatcccttgtgtgtcttca 493
Query: 185 tcttccaggccaggtttggggatcatgctgggcttgggtaaggactgtgtcacatgttcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tcttccaggccaggtttggggatcatgctgggcttgggtaaggactgtgtcacatgttcc 433
Query: 245 tagtaacgtggcacaaaccactactggccatgggtgagggacattctggtagaaagcaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tagtaacgtggcacaaaccactactggccatgggtgagggacattctggtagaaagcaag 373
Query: 305 actcccagaggcctccttcttgtccctatactgcataaagcagccagactgacagcttca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 actcccagaggcctccttcttgtccctatactgcataaagcagccagactgacagcttca 313
Query: 365 gttacacactctgctagaatgatggcagaaacaatggccaacccaagccaagaatccaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gttacacactctgctagaatgatggcagaaacaatggccaacccaagccaagaatccaaa 253
Query: 425 ggcagctcaggaaagccacaaaagctgtgacctagaaagtcctcccagggccccttggta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ggcagctcaggaaagccacaaaagctgtgacctagaaagtcctcccagggccccttggta 193
Query: 485 ttgcaaactttatatgccccagtacaggggaatgccagggccaagaagcgggagtgggtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttgcaaactttatatgccccagtacaggggaatgccagggccaagaagcgggagtgggtg 133
Query: 545 ggtaggggaacagagcagatggagagtatagggaactttcaggatagcatttgaaatgca 604
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ggtaggggaacagagcagacggagagtatagggaactttcaggatagcatttgaaatgca 73
Query: 605 aataaagaaaatatctaataaaaataattaattaactaattaaaataaat 654
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aataaagaaaatatctaataaaaataattaattaactaattaaaataaat 23
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_m08.g1 MSMg01no297_m08.g1 CHROMAT_FILE:
MSMg01no297_m08.g1 PHD_FILE: MSMg01no297_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:34:17 2005
(611 letters)
>mm_chr19_8990190_8991200
Length = 1011
Score = 1158 bits (599), Expect = 0.0
Identities = 608/611 (99%)
Strand = Plus / Plus
Query: 1 cacttgtgacctagtctttccttctgtgtgttaccaagcccttcatactcagtatcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacttgtgacctagtctttccttctgtgtgttaccaagcccttcatactcagtatcctgt 260
Query: 61 tgctgtaactggagcacagtcatttgtgaagaccaaggggccttgtcgttctttttctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctgtaactggagcacagtcatttgtgaagaccaaggggccttgtcgttctttttctct 320
Query: 121 tccttagggtccctaccttctccttagaccccatctattcaagcctcttgtttgttgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttagggtccctaccttctccttagaccccatctattcaagcctcttgtttgttgatg 380
Query: 181 ccatttcttggaagaagatgagggcagtgaacattagggttccttttcttcttccctgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatttcttggaagaagatgagggcagtgaacattagggttccttttcttcttccctgtt 440
Query: 241 ccctcctatccaaaatgcccatcctttcattccttcccctgaatgtccccttctctgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctcctatccaaaatgcccatcctttcattccttcccctgaatgtccccttctctgttc 500
Query: 301 cactgatacactgggaccaccccttacttggtaagggacgaacgcatcaagattgaggtt 360
||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||
Sbjct: 501 cactgatacactgggaccaccccttacttggtaagggacaaatggatcaagattgaggtt 560
Query: 361 cctggagaacgtcctcttccttctcatctcaaccttgtcttcctgtttctttccagagct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctggagaacgtcctcttccttctcatctcaaccttgtcttcctgtttctttccagagct 620
Query: 421 gctgcatttctcccatcttagagggagacgcttccacacaattaggagggcaaggttatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctgcatttctcccatcttagagggagacgcttccacacaattaggagggcaaggttatt 680
Query: 481 aaacttcttttgcccctctggtccccttgggacactcaagatagagacatgagttgtggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaacttcttttgcccctctggtccccttgggacactcaagatagagacatgagttgtggt 740
Query: 541 ttcactgaatcacggtcacctgtatttattgctgggaagaagactgagggtggggggaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttcactgaatcacggtcacctgtatttattgctgggaagaagactgagggtggggggaga 800
Query: 601 cgatcatgtgt 611
|||||||||||
Sbjct: 801 cgatcatgtgt 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
