XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGGATCCGCGGAATTCTAC
AAGCTTCCTCATTCTTTAAACTCAAGGTCATCAAGCTATGCCCTTCTCTG
GTCTTAGAAATTAGAGTCCTTCTCTGAACACCACTGATTAATGTGTGAGC
CTTCAGGTTTCCACTGTTCTGGAAAGTCTATTTAGTCCCAGTCTATGTTG
TGACTCTGATTTAATACCCTCTTAATGTGGAGTTTGGTCTGAAGGTGAAG
ATCACAAATTGATTTCCACCAAGTTTTAATACTAAAATGTGGTTTCCATC
ATCCTAAATCAATATTTTATTCTTGTGCCTTTAAAGCTCAAATTAGGAAT
AAAGTGTCATAGAAAGGAAGAAATAGGAACAGATTCTTTTGAAGGAAGAC
ATACAAAGTGAGAACATGTAAAACAACAGCTTCAATTACATTTTTGTTTT
CCCAAAGAAGCAAGACAAATTGCAAAGCTCTCTATCCAAAAGTGCAATTC
CTGTGCCAGGGTGTCATATATCATTCCTTAACAGAGCAATGTACTTATAC
ATTATGCAGTTGATATGGAAGCAGAAACAACTGATTAATTCAGCTAGATT
GAAGAAGCAGGATATCATAATCACCATAATCATTATCTTTAGGATCATTA
TAATATTTATTGGATATTTACAATCCTATTATGTAGGCACTATTGTAATT
TACATGTATAGAATTTTAATGGAAACTGAATTCTAAACAATTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCTGTTTAGCTCTATACCTCATTTTTTGATTGG
GTTGTTTGGTTTTTTGGAGGTTAGCTTCTTGAGTTCTTTATATATTTTGG
ATATTAGCCCTCTATCATATGTGGGAGTAAATGGGAGTTCTTCCCATTTG
GAAGGGAGAAGAAAGCAATCATGGGGAAGCAGAGGGAAGCAGGAACCTTA
GTGGGAGAGGAGAGGAGAAGGGGAAAGGGGAAACATGATCAGGTATTGGG
CGTGNNCCCCCNNCCCCCTTTTTTTTCCCTTCATGCCTCGCCAACATGTA
CTGACATTCATACTTACCCCTTCCCCTCCGTAATCATGTTGATATTACCT
TACTATTTTCGTTTGATTTTCCCCCCCCTTTTTTTTTTTCTTATTCCTCT
TCCTCCTTTCCCTGCTTTATTTTTTCGGCCCCCTTTTTTTATTTTTTCTC
TTTTCCCCTTTTTCCCACCTTCTCTTTTTTTTTTTCCCTTTGTTTCGCCC
GTTCGTCTCGTTCCCCTGTTCTTTTCTCTTTATTTATTCTGCGTGCTTGC
CGCCCGTCTTTTCCCTGTTATACTTTCTTCTTTTTTGTTTCCCCCTGTTG
GCCCTTTCCCCCACTTCTTTCCCTATCCTATTCCTCCCCTTTTCCCACCT
TTGGCGCCACGCCATGATCACGCTCCTTCATCTTTCCTGTTCCACTTTCC
CTTTCATGCTTCCCATCTCCTAGTTATCACCATTTACCCACTTCTTTCAC
CTTACCTTTACGTTACCCCTCATCTTTTC

Query= MSMg01no303_b23.b1 MSMg01no303_b23.b1 CHROMAT_FILE:
MSMg01no303_b23.b1 PHD_FILE: MSMg01no303_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:40:56 2005
         (704 letters)



>mm_chr19_35853170_35854273
          Length = 1104

 Score = 1274 bits (659), Expect = 0.0
 Identities = 689/699 (98%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggaattctacaagcttcctcattctttaaactcaaggtcatcaagctatgcccttctctg 65
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattctacaagcttccttattctttaaactcaaggtcatcaagctatgcccttctctg 265

                                                                       
Query: 66  gtcttagaaattagagtccttctctgaacaccactgattaatgtgtgagccttcaggttt 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtcttagaaattagagtccttctctgaacaccactgattaatgtgtgagccttcaggttt 325

                                                                       
Query: 126 ccactgttctggaaagtctatttagtcccagtctatgttgtgactctgatttaataccct 185
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 326 ccactgttctggaaagtctatttagtcctagtctatgttgtgactctgatttaataccct 385

                                                                       
Query: 186 cttaatgtggagtttggtctgaaggtgaagatcacaaattgatttccaccaagttttaat 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cttaatgtggagtttggtctgaaggtgaagatcacaaattgatttccaccaagttttaat 445

                                                                       
Query: 246 actaaaatgtggtttccatcatcctaaatcaatattttattcttgtgcctttaaagctca 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 actaaaatgtggtttccatcatcctaaatcaatattttattcttgtgcctttaaagctca 505

                                                                       
Query: 306 aattaggaataaagtgtcatagaaaggaagaaataggaacagattcttttgaaggaagac 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 506 aattaggaataaagtgtcatagaaaggaagaaataggaacagattcttttgaaggcagat 565

                                                                       
Query: 366 atacaaagtgagaacatgtaaaacaacagcttcaattacatttttgttttcccaaagaag 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atacaaagtgagaacatgtaaaacaacagcttcaattacatttttgttttcccaaagaag 625

                                                                       
Query: 426 caagacaaattgcaaagctctctatccaaaagtgcaattcctgtgccagggtgtcatata 485
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ccagacaaattgcaaagctctctatccaaaagtgcaattcctgtgccagggtgtcatata 685

                                                                       
Query: 486 tcattccttaacagagcaatgtacttatacattatgcagttgatatggaagcagaaacaa 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tcattccttaacagagcaatgtacttatacattatgcagttgatatggaagcagaaacaa 745

                                                                       
Query: 546 ctgattaattcagctagattgaagaagcaggatatcataatcaccataatcattatcttt 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 746 ctgattaattcagctagattgaagaagcaggatatcataatcaccataatcatcatcttt 805

                                                                       
Query: 606 aggatcattataatatttattggatatttacaatcctattatgtaggcactattgtaatt 665
           |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||
Sbjct: 806 aggatcattataatatttattggatatttacaatgctattctgtagacactattgtaatt 865

                                                  
Query: 666 tacatgtatagaattttaatggaaactgaattctaaaca 704
           ||||||||||||||||||||||||||||| |||||||||
Sbjct: 866 tacatgtatagaattttaatggaaactgagttctaaaca 904


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1104
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1094
Effective search space:   759236
Effective search space used:   759236
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)