Query= MSMg01no305_k09.b1 MSMg01no305_k09.b1 CHROMAT_FILE:
MSMg01no305_k09.b1 PHD_FILE: MSMg01no305_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:50 2005
(412 letters)
>mm_chr19_4328516_4329327
Length = 812
Score = 714 bits (369), Expect = 0.0
Identities = 402/419 (95%), Gaps = 11/419 (2%)
Strand = Plus / Plus
Query: 4 ggaattcactttgtagaccaggctggcctctgcctccccagtgctgggattaaaggcgtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggaattcactttgtagaccaggctggcctctgcctccccagtgctgggattaaaggcgtg 252
Query: 64 cgccaccacgccctgcaacataaataattctt----------taaaaaaaaaaaaaaacc 113
||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 253 tgccaccacgccctgcaacataaataattcttaaaaaaaaaaaaaaaaaaaaaaaaaacc 312
Query: 114 c-aaaaaaccaaaaaagacatcttccttctaaacccatctcagttaagtctccctgactt 172
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 caaaaaaaccaaaaaagacatcttccttctaaacccatctcagttaagtctccctgactt 372
Query: 173 tacatatacacaatttctctggcaccaataccaagccttgcaaaattttcactcggatca 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tacatatacacaatttctctggcaccaataccaagccttgcaaaattttcactcggatca 432
Query: 233 cttactgctaagcactgtcggaggacacaggattgcttcatgcgtccaggtccaccaaat 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cttactgctaagcactgtcggaggacacaggattgcttcatgcgtccaggtccaccaaat 492
Query: 293 ttcttcatgtccctgcagtagtggcagactccacattctccttgcacacaagctttgcat 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ttcttcatgtccctgcagtagtggcagactccacattctccttgcacacaagctttgcat 552
Query: 353 ttcctgtattgtactcttctccgcctggctcctgacacaatgggggaggctgcagcagg 411
|||||| | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttcctgcaccgcactcttctccgcctggctcctgacacaatgggggaggctgcagcagg 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no305_k09.g1 MSMg01no305_k09.g1 CHROMAT_FILE:
MSMg01no305_k09.g1 PHD_FILE: MSMg01no305_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:45:50 2005
(390 letters)
>mm_chr19_4484240_4485029
Length = 790
Score = 609 bits (315), Expect = e-179
Identities = 339/347 (97%)
Strand = Plus / Minus
Query: 34 aatgtttgccttgtccaggcacttcagtaggagtggtggtctcttcctttgtgatcccaa 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aatgtttgccttgtccaggcacttcagtaggagtggtggtctcttcctttgtgatcccaa 731
Query: 94 acttatttctaataaaacccagaagatgtcagatcccctggaactgtagctagagacggc 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 acttatttctaataaaacccagaagatgtcagatcccctggaactgtagctagagacggc 671
Query: 154 tgtgagccaccacgtgggttctgagaatcaaacccgggtcctctgtgagagcagtcaatg 213
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 670 tgtgagctaccacgtgggttctcagaatcaaacccgggtcctctgtgagagcagtcaatg 611
Query: 214 ctcttcacctctgtgccattgctccggttctgtctggtattttcatctcagaatgggctg 273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ctcttcacctctgtgccattgctccggttctgtctggtattttcatctcagaatgggctg 551
Query: 274 caggtagaaaggaggaaactgaatggcacttaggccagagaccatctttgacttttttcc 333
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 550 caggtagaaaggaggaaactgaatggcacttaggcccgagaccatctttgacttcagtcc 491
Query: 334 ctgttcttcatggctgccttgtgtttttttacttttggttttacttt 380
||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 490 ctgttcttcatggctgccttgtggttttttacttttgtttttacttt 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 790
Length adjustment: 9
Effective length of query: 381
Effective length of database: 781
Effective search space: 297561
Effective search space used: 297561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
