Query= MSMg01no307_h22.b1 MSMg01no307_h22.b1 CHROMAT_FILE:
MSMg01no307_h22.b1 PHD_FILE: MSMg01no307_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:34 2005
(697 letters)
>mm_chr14_51997129_51998224
Length = 1096
Score = 350 bits (181), Expect = e-100
Identities = 374/447 (83%), Gaps = 35/447 (7%)
Strand = Plus / Plus
Query: 77 ttttaagagtattaatttagtcatatttcatgaatatatct--gtcctacaaatcattat 134
|||||| || ||||||||| ||||||||||||||||| | | || || | || ||| |
Sbjct: 287 ttttaaaagaattaatttaatcatatttcatgaatatgtttgcgt--tatatataatttt 344
Query: 135 gcacaccatgtacatataggagcccatgaagaaccaa--atattaagtcaaatcta-ctg 191
|||||||||| || ||||||||||||||| ||| || ||||||||| ||
Sbjct: 345 gcacaccatg-----at-----cccatgaagaaccaaagataata--tcaaatctagttg 392
Query: 192 gactaagtcaagagactgctaggtacacaatccatgttctctgtaagatta-tatagaag 250
| || |||| |||||| |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 393 g-ttaggtcatgagactattaggtacacaatccatgttctctgtaagatcagtatagaag 451
Query: 251 actaaagtagttgcaaatttattagaaactgct-aagtatgtaatattcagaaggccatg 309
|| |||||| |||||| ||||| |||||||||| |||||||||| ||||||| |||||||
Sbjct: 452 acaaaagtatttgcaattttatgagaaactgctaaagtatgtaaaattcagagggccatg 511
Query: 310 ttcaaagccagatgtgatatgaatccaggaaataggggataagagttgaccaaaaaggta 369
|| ||| |||||||||||||||||||||||| ||||||||||||||||||| | | |||
Sbjct: 512 tt-aaaaccagatgtgatatgaatccaggaagtaggggataagagttgacccatgatgta 570
Query: 370 gaatataacacg--agactcataatcagtatatta-cataccacacccattattaaaaca 426
|||||| ||| | |||||||| ||| |||||||| | | ||||| | |||||||||| |
Sbjct: 571 gaatat-aca-gtaagactcatcatctgtatattatc-ttccacatctattattaaaa-a 626
Query: 427 a-tta-tctagggtttgcaaaatgcaaaaagtttatggttagtttttcaattattttgcc 484
| ||| | || ||||||||||||||||||| | ||||||||| |||||||| ||||| ||
Sbjct: 627 atttact-ta-ggtttgcaaaatgcaaaaa-tgtatggttagcttttcaatcatttttcc 683
Query: 485 tttcattctatataatgaattaaaatt 511
|||||||||||||||||||||||||||
Sbjct: 684 tttcattctatataatgaattaaaatt 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1096
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1086
Effective search space: 746082
Effective search space used: 746082
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_h22.g1 MSMg01no307_h22.g1 CHROMAT_FILE:
MSMg01no307_h22.g1 PHD_FILE: MSMg01no307_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:34 2005
(656 letters)
>mm_chr19_61186475_61187530
Length = 1056
Score = 1261 bits (652), Expect = 0.0
Identities = 655/656 (99%)
Strand = Plus / Plus
Query: 1 ctctctttaatgagcaacagaaaactgactccaaagtgacctaggcagcctaggatagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctctttaatgagcaacagaaaactgactccaaagtgacctaggcagcctaggatagtg 260
Query: 61 aacagtatctagaatacaaaccatgaggtggtaaatacctcagttaacacttgctgatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagtatctagaatacaaaccatgaggtggtaaatacctcagttaacacttgctgatgc 320
Query: 121 tgtggccctgaagttctggagatacagggaactctatggacattggcttcccttagttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtggccctgaagttctggagatacagggaactctatggacattggcttcccttagttcc 380
Query: 181 ataaaccgtgtccatcacaccaaaggtggaatggaatactgaccattctcacctttgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaaccgtgtccatcacaccaaaggtggaatggaatactgaccattctcacctttgatg 440
Query: 241 actttgaaatcctgagactcctgctccccactttcttagcaccatgattacaggcctgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actttgaaatcctgagactcctgctccccactttcttagcaccatgattacaggcctgtg 500
Query: 301 ctactgtgcctggcttatgaggattcaacttcatttaatgtcatgaccatgatggaatga 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ctactgtgcctggcttatgaggattcaacttcatttaatgtcatgacaatgatggaatga 560
Query: 361 gtaagatgaacagtcatacttaactatattgcaaaaccacttatctctgtgaacctggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaagatgaacagtcatacttaactatattgcaaaaccacttatctctgtgaacctggat 620
Query: 421 ttcacaatctgtagaatgtgaagagaactctgccctagtcctttgatgagttgtaataga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcacaatctgtagaatgtgaagagaactctgccctagtcctttgatgagttgtaataga 680
Query: 481 ctcaatggaagacagtggaggctaaggcaggagggctagatttgatggaagactttttcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcaatggaagacagtggaggctaaggcaggagggctagatttgatggaagactttttcc 740
Query: 541 gttgctggaattagtaccagagcttttatcctggttatcctagcaagccagactctgtca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttgctggaattagtaccagagcttttatcctggttatcctagcaagccagactctgtca 800
Query: 601 ctcatccttaaataagccaattaaaagaactgaattttctagctgtgacatgccta 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctcatccttaaataagccaattaaaagaactgaattttctagctgtgacatgccta 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
